Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2632 ATGGGAAACGGCATAGGGAAGCTAACGGTGTGCTTCACCGGCAACGGAAACGGGGGTCGCCGGAAGCAGGACATATCCATTTTAATAACGGAGCCTCTGGACGAGGGTCTGGGCCACTCTTTCTGCTACGTCAGACCCGACCCGACCCGAATTTCGTCATCGAAGGTGCACTCGGAGGAAACGACGACGTTCAGAACAATCTCGGGCGCGTCGGTGAGCGCGAACACGTCGACTCCGTTATCGACGGCGTTCGTGGACCTGTACTCGTACGGCTGCATCGACCGCGCCGCGGCGTTCGAGAGTTCCACCTCGTTCGCGTCGCTCCCGCTGCAACCGATTCCGCGGAACCTCGCGAACTCGGGCCCCTTCTCGGGGAACCTGGGCGGCGGGGGGTTTCCGGGGTCGGGCCCGCTCGAGAGAGGCTTCATGTCGGGCCCAATCGAGCGCGGGTTCATGTCGGGGCCCATCGATCGGGGGATATTTTCGGGCCCTATTGAACGGGAGGCAAACGGATCGGATCGGTTTCAGAGAAGCTTTTCCCACGGAGGTTTGGGTTTAGGgttgggtttgggtttgggtttggggTTGGGTGTGAGAGTGAGGACGAGGAAGGGTCGGTGGATTCGCGTTCTGCAGAGGGCGATTTCGAAGACTCTGTCTCGGGGGCAGAACTCGATCGTGGCCCCGATCAAGGGGGTGGTGGTGAAGGAGCCGGAGTGGATGGTGGCGGCGGCGGAGAAGCAGCACCACAATGAGAACCTCAGCGTGAATTTGAGCAGCGAGGGGAGTTTGGAGGACGACGATTCCATGGAGAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAAGACCGTGTCCATGTTGTCGTGTCCGAGGAACACGGTTGGGTTTTCGTGGGGATCTACGACGGTTTCAGTGGACCCGATGCCCCTGATTACCTCCTTTCAAATCTCTACACCGCGGTGCATAAAGAACTTAAAGGGCTGTTGTGGGATGATGGGTCTGCGCCGGAGAATTCGGTGCCCAATGTTACAGTTACAGATGGAGATGCTTGTTCTCACTGTGCTGAGCaagagaataataatattaacaacaacaacaacaataattataataataatagtaagagTAAGAGAGGGAGGAATTCGAGGAACAAGTTCAAAGGTGCTGCGAAGAAATGGGAGGAGAATCAGCGGAGGTGGAAGTGTGAGTGGGATAGGGAGAGGTTAGAGCTTGATCGGAGATTGAAGGAGCAGTTGAGTTTGAGTCGATCTGGGTCCGCGGGAGCGAGTTCTATTAATCATTCGGATGTGTTGGAAGCTCTGTCTCGGGCTCTGAGGAAGACGGAGGAGTCTTATCTTGATGTTGCGGATAAGATGGTGATGGAAAATCCTGAGCTTGCTTTAATGGGTTCGTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTATGTGATGAATGTGGGGGATAGTCGGGCTGTGCTGGCTCAGAAGGCTGAGCCTGATTACTGGCTTGGGAAGATCAGGCAGGACTTGGAGAGGATCAACGAGGAGACGATGAATGATCTTGAATCCTGGGATGTTGATACGTCCAACTTGGTTCCGAGTTTGAGCGCGATTCAGCTTACCAAGGATCATAGTACCAGTGTTGAGGAAGAAATCCAGAGAATTAAGAAAGAGCACCCGGATGATCCTTGTGCTGTACTAAATGACCGTGTTAAGGGTTCTCTCAAGGTTACTCGAGCATTTGGTGCCGGATTTCTCAAACAGCCCAAGTGGAACAACGCACTTCTGGAGATGTTTAGAATAGACTACGTAGGAAATTCTCCTTACATCAGCTGCCTACCATATCTAAAACACCACAGATTAGGCCCAAAGGACAAATTTTTGATTCTATGCTCCGATGGGCTCTATCAGTACTTGTCAAACGAAGAGGCAGTGGCTGAAGTTGAGCTTTTCATCACCTTGCAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCAAAGAAAGCTGGTTTGGACTTTCATGAGTTGCTCGAAATTCCACAGGGTGATAGGCGCCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2157 0.5086 MGNGIGKLTVCFTGNGNGGRRKQDISILITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLANSGPFSGNLGGGGFPGSGPLERGFMSGPIERGFMSGPIDRGIFSGPIEREANGSDRFQRSFSHGGLGLGLGLGLGLGLGVRVRTRKGRWIRVLQRAISKTLSRGQNSIVAPIKGVVVKEPEWMVAAAEKQHHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFSGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSVPNVTVTDGDACSHCAEQENNNINNNNNNNYNNNSKSKRGRNSRNKFKGAAKKWEENQRRWKCEWDRERLELDRRLKEQLSLSRSGSAGASSINHSDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDTSNLVPSLSAIQLTKDHSTSVEEEIQRIKKEHPDDPCAVLNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2632 718 SMART PP2C_4 268 707 IPR001932 -
Ssu3g2632 718 Pfam Protein phosphatase 2C 431 665 IPR001932 -
Ssu3g2632 718 MobiDBLite consensus disorder prediction 358 392 - -
Ssu3g2632 718 CDD PP2Cc 435 709 IPR001932 -
Ssu3g2632 718 PANTHER PROTEIN PHOSPHATASE 2C 17 718 IPR015655 GO:0004722|GO:0006470
Ssu3g2632 718 Gene3D - 241 714 IPR036457 -
Ssu3g2632 718 MobiDBLite consensus disorder prediction 358 379 - -
Ssu3g2632 718 PANTHER - 17 718 - -
Ssu3g2632 718 ProSiteProfiles PPM-type phosphatase domain profile. 267 709 IPR001932 -
Ssu3g2632 718 MobiDBLite consensus disorder prediction 252 279 - -
Ssu3g2632 718 SUPERFAMILY PP2C-like 281 710 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2632 Ssu-Chr3 79891694 79894510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2632 1 718 PP2C-type Phosphatase Gene Family AT1G07630 67.125 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2632 - - gmx:100810214 1227.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2632 3 79891694 79894510 Ssu3g2632 3 79891694 79894510 ECH