Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2629 ATGGATGAATGTCATGGGAAGGTCCACGTGGCAGTTGGGAAGTCGCTGAAGAAGGCCGCGACTTTGCTTCAGTGGTGTTTCACCCACTTCAGCAACGCACAGATTGGCTTACTTCATGTTTACCAACCTTCTACTATGATCCCCACACTATTGGGAAAATTGCCAGCATCCCAAGCTAGTCCTGAAGTTGTGTCTGCCTACAGAATAGAGGAAAGAGAAGAGACCAAGAGGCTTTTGGAGAAGTACTTGAGCCTTTGCCGTGCAGCTAAGGTTAGGGCAAGCAGTGTCATAGGTGAAGCTGATCAAGTCCAGAAAGGGATTGTTGAATTGGTTACTGTGCATAATATCAGGAAGCTTGTTATTGGAGCAATACCCAAAAATTGCATGAGAGTCAAAAGGAATTCCAGTAAAGCAAATTATGCTGCTCAAAATGCTCCCCCATTCTGTGAAATATGGTTCATCTATAAAGGTAAGCACATTTGGACAAGAGAAGCCTCTGAAACTCCTTGTTCTTTGTCTTCACGTGCTCAACCTGAGACTGCAGCTGAAGAGAGCTTGAGTTGTAGATCTTTTCAATATGGTACAAATGAATTATTCCATTCAGGATGTCTTCAATCAAATTCTCCACAGACTACAAGAAGTACTGTTCAGAGTGAAATCATTGAAACAGAAGCTACTTTTTCATCCAAATCATCCAGTTGTAATAGTCATTGTTCTCCCCAACATTCGGCTGGTTGGTATTTAGATACTCATTCAGAGTTTGAGGAAGAAACAATTGATAGTCAACTTATTGAAGCCAAAAGAGAAGCTAATGCTGCAACAGACAAGGCCCTTGTAGAGCTGTTGAAGAGCAAAAGGTTGGAAGTCAAAGCCATTGAGGCCATAAGTAAGGTCAAATTGTTTGAATCTGCCCATGCACAGGAAGTAAAGCTCAGAAAAGAGGCTGAGGATGCGCTGAGAGCTACAATACAGGAGCAACAGATGTTCCTTGATGAGAAAGAAGAAATTGCTAGTGAGCTGGAAAGGACCATGAGAAGTATTTCTCTTCTAGGCAGTTGTGCACATGAAACCAACCATAAGCGAGATGAAGCTGCAAATGAACTATCACTAGTTCAAGCATCCTATCTCAAACCTGCGGCATGA 1143 0.4252 MDECHGKVHVAVGKSLKKAATLLQWCFTHFSNAQIGLLHVYQPSTMIPTLLGKLPASQASPEVVSAYRIEEREETKRLLEKYLSLCRAAKVRASSVIGEADQVQKGIVELVTVHNIRKLVIGAIPKNCMRVKRNSSKANYAAQNAPPFCEIWFIYKGKHIWTREASETPCSLSSRAQPETAAEESLSCRSFQYGTNELFHSGCLQSNSPQTTRSTVQSEIIETEATFSSKSSSCNSHCSPQHSAGWYLDTHSEFEEETIDSQLIEAKREANAATDKALVELLKSKRLEVKAIEAISKVKLFESAHAQEVKLRKEAEDALRATIQEQQMFLDEKEEIASELERTMRSISLLGSCAHETNHKRDEAANELSLVQASYLKPAA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2629 380 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 145 - -
Ssu3g2629 380 PANTHER OS02G0152300 PROTEIN 4 374 - -
Ssu3g2629 380 CDD STK_N 7 157 - -
Ssu3g2629 380 Gene3D HUPs 4 146 IPR014729 -
Ssu3g2629 380 PANTHER OS10G0100500 PROTEIN 4 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2629 Ssu-Chr3 79878850 79881503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2629 7 352 U-box Gene Family AT2G45910 30.790 6.04e-36 137