Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2626 ATGATAGCGCATCAGGGGAAACTAACGAAGCTGCGGTGGGGCAAGCTAGAGGAGGAGGACGGCGAGGATCTAGACTTCCTTCTGTTGTCGCGGCAGGTGATAGGGCCGAACGAGAACGGCATCAAGAAGGTGATTGAGTACAAGTTTGACGAGGACGACAACAAGGTCGAGATCACCACCACCGCACGCACTCGTAAGCTTGCCAACGGGCTTCTCAACAAACGCGCCGTCAAGCGCAGCTCCTGGCCCAAGTTCGGCGACGCTGTCCACGAGGACATCAGCAACTGCCTCACCATGGTCTCCACCGAAGAGATCCTCCTTGAACGCCCCTAG 333 0.5736 MIAHQGKLTKLRWGKLEEEDGEDLDFLLLSRQVIGPNENGIKKVIEYKFDEDDNKVEITTTARTRKLANGLLNKRAVKRSSWPKFGDAVHEDISNCLTMVSTEEILLERP 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2626 110 Pfam Eukaryotic translation initiation factor 3 subunit G 32 109 IPR024675 -
Ssu3g2626 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 6 110 - -
Ssu3g2626 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 6 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2626 Ssu-Chr3 79829346 79829678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2626 2 110 Eukaryotic Initiation Factors Gene Family AT3G11400 62.385 9.01e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2626 K03248 - gmx:100818725 173.711