Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2568 ATGTACACACACCGCAGCACCTCCTTCTCACGCGCCGCCGACTCCCTCGGCCATTTTCTCTCGCCGCCGGACGCATCCGCGGCATCTCCAATGCAGTACGCTGCCGCTCCTCAGGCGCACCACTGCCAGCAACTCGGCCCGGGCGAGTGCGACTCGCAACTCAACTCGGAGGTGAGTTCGAACGCCACGTACAACAGTTGCAGCAGCGGGTGCACGAGCCACATGGGGTCGCCGAGTTCGCTCGCGAGTTACGAGAGTCGACGAGCGTGCTTGATGCAGAGGAGCGTCAGCAGCCACTCGCTGCAGAAGAACAGTGGGGTCCACCATCCCTTTTCTCCTCTCTTTGCCGAGTTGCTTGACTCGGAAAACGGTCCCGTACGGAGAGCTTGCAGTACCGGTGACCTTCAGAGATTCAATGGAATGCTACATTATTATCATTCTCATTCTGATACCCCATTGTCAAGTGAAAGTAGTTTGATCATAGAAGAAATGAGCAGGACCAGTCCGTATAGCCCAGAGGAGAAGAAGGTAAGGATTGAGAGATATAGGAGCAAGAGAAACCAGAGGAACTTCGGCAAGAAAATTAAggtttag 594 0.5438 MYTHRSTSFSRAADSLGHFLSPPDASAASPMQYAAAPQAHHCQQLGPGECDSQLNSEVSSNATYNSCSSGCTSHMGSPSSLASYESRRACLMQRSVSSHSLQKNSGVHHPFSPLFAELLDSENGPVRRACSTGDLQRFNGMLHYYHSHSDTPLSSESSLIIEEMSRTSPYSPEEKKVRIERYRSKRNQRNFGKKIKV 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2568 197 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 27 196 IPR045281 GO:0009909
Ssu3g2568 197 PANTHER CCT MOTIF PROTEIN 27 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2568 Ssu-Chr3 78660255 78662389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2568 - - gmx:102667349 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2568 3 78660255 78662389 Ssu3g2568 3 78660255 78662389 ECH
Ssu8g0511 8 8052863 8055421 Ssu3g2568 3 78660255 78662389 PCT