Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2555 ATGGACCAGTTCATAGAAAACTTGCCGCCAATGGATCTGATGCGCTCCGAGAAGATGACCTTCGTTCAGCTCATTATCCCCGCCGAGTCCGCTCACCGAGCCATTACCTATTTGGGCCAACTCGGCCTCCTTCAGTTCCGCGACTTAAATGCTGAAAAAAGCCCCTTCCAGAGAACATTTGTTAACCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTAAGATTCTTCAAGGATCAAATCAATAAAGCTGGATTAATGTCTTCTCATTCGATCTTGCAATCAGATATTTATCTGGAGGATTTAGAGATACAACTTGCCGAGCATGAACATGAGTTAATTGAAATGAACTCTAACAGTGAGAAACTTCGGCAATCATATAATGAACTCCTGGAGttcaaaattgtattacaaaagGCATGTGGTTTTCTTGTTTCAAGTCGTGGCAATGCCGTTTCAGAAGAGAGAGAACTGGAGGAGAATGTTTTCTCAAATGGAGACTATGTTGAGACACCATTTTTGTTTGAACAGGAAATGAGGCCTGCACCATCAAATCAATCTGGTTTAAGATTTATCAGTGGGATAATTTGTAAATCCAAAGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCCACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGATGAACAGATCATGGATCCTATTTCAACTGAGATGGTTGAGAAAACTGTGTTTGTTGTGTTTTTCTCTGGGGAGCAAGCAAGAACAAAGATTCTGAAAATATGTGATGCATTTGATGCAAATTGTTACCCTGTTCCTGAAGATATAACTAAACAGAGGCAAATAACTACGGAGGTTTCATCACGTCTTGCTGACTTAGAGGCAACTCTGGATGCTGGGATTAGGCATCGGAATAAGGCTCTAGCTTTAGTAGGAGGCCATTTAACAAAATGGATGGACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAATTTTGATGTCACCAAAAAATGTCTTGTTGGAGAGGGCTGGTGCCCTATATTTGCAAAAACACAGATTCAGGAGGCACTGCAACGTGCAACTTTTGACAGCAATTCTCAAGTTGGCATAATCTTTCATTCAATGGATGCACAGGAATCACCACCCACATATTTTAGGACCAACAGTTTCACAAGTCCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATATCAAGAAGCAAATCCTGCAGTTTATACAACTATGATATTCCCATTTCTTTTTGCGGTTATGTTTGGTGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCGTTGGTTCTTATAGCACGACAAAGCAAGCTCAGCACTCagCGACTTGGAAGCTTTATGGAGATGCTATTTGGCGGGCGCTATGTGCTACTTTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATATTTGGTGCATCTGCTTACAAATGCCGAGATAGTTCATGCAGGGATGCACATACCACTGGCTTAGTAAAATACCGAGAACCATATTCATTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGTACAGAATTGGCTTTTCTAAACTCCCTCAAGATGAAGATGTCCATTCTCTTTGGTGTGGTGCACATGAACTTGGGaattatattaagttatttcaatgctcatttctttggcaacTCACTGGATATAAGGTACCAGTTTGTTCCACAGATGATTTTCCTTAACAGTTTATTTGGGTATCTTTCCCTTCTCATTGTTGCCAAGTGGTGTTCCGGCTCTCAGGCAGACCTTTATCATGTAATGATTTACATGTTTTTAAGCCCTTTTGACAATCTTGGTGAGAATCAATTGTTCTGGGGCCAAAGGCCACTTCAAGTTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCATGGATGCTCCTTCCAAAGCCTTTTATACTAAAGAAGCTTCATAATGAGAGATTTCAAGGACGCACTTATGGTGTGCTTAATACCGCTGAGGTTGATCTTGAGTTGGATCCAGATTTTGCCAGGCAACATCATGAGGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATTCACTCCATTGAGTTTGTTCTAGGTTCAGTTTCAAATACGGCCTCATATCTACGACTTTGGGCATTAAGCTTGGCTCACTCAGAACTTTCTACCGTTTTTTATGAGAAAGTCCTGCTACTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTAGTGGGGCTAGCTGTTTTTGCCTTTGCAACTGcatttatactattaatgatGGAGACTCTCAGTGCTTTTCTTCATGCCTTGCGTCTTCACTGGAGAAGAAGTGATATCATGGACTCCATTTCTAACCTTCCGCTCCTAGAGATCGCAGAGGAAGACGATTCTTTACTCTTCGATGTTTCCACAGCGACCGCCAACGTTTTCGCTTGCTCCCCTCTCCTACCCCTCAGATCTAATCCTCCTCAAACCGAAGGAAGAGTAGGTGGCGCTGCTGTGGATTCTGAAAATCCGAGTTCCTCGCTTAATGAGAATGCGAACAAAGAGAACGCGGATTGTAACAAACCGCAGAAGCTTAGCGTGGAGCCTCAGCagatgaagaggaagaagaaaggaggcgGTTACAATTTGCGCAAGAGCTTGGCATGGGATCGAGCTTTCTTTACCGAACAAGGTGTTTTGAACCCGGTGGAGCTTTCTATGATTAGTGGTACTGCCACTCCTAAGGCAGGGTTGAATTTGGAAGTTATCCATGAAGAGGAGTCCGTCGGCACTTCGATAGAGTTGCAGGAAATTGAAGAAGATTTGTTCATGCATTCGTCAGATGCTGTTCCCGTTGAAGATAGAATGATTGGTGCTACTGCTGGCTTATCTCCAAAGCCAGGTGCATTACCCAAAGCTTCTCTAGCAGCGGCTTTCTTGGCAGCGAGGAAAGTGCTTACTGTCAATGACTCGGCTGGGAACAGATCTAAGCGCAGTGCTTGTCCACAGCTGCAAGCAAAGAGGAAAGTGCTTACGGTCAATGACTCGGTTGGAAACAGATCTAAACGCAGTGCTTGTCAGCGGCTGCCAGTAGCTTCATCTTCATATCCTTGCCATTACCTGATACCTGGTCCTACTACAACTGCTAGGAGTGGAATGTTGACCACAGGTTCCTTGAAGAGAAATCACAATGCTCATCCTGCTACTAATCTTCAGAAGTATGCTGGAGTAAAAGGCCCATCCAAAAATCCTAAAACTGTCCCAAGTAACCCAAAATTTTGTCTGGGTGATAAATGTTCAGTTACTAGAACACTTACCAAGCAGGCTGGGAAACATTTGGATAACTCAGTTTCAGAAACACATCCACCATCCAGAGTGCTTCAATCAGGAACTGAAGCAAAAAATAAGGTGTCAGAAGCTTGTCTCCCACAAGGTGTTTCTGACATTGGCGAGAAAAAGCAGCAGACACGGCTTCAAACAACAAAATCATCAGGCCTACGGATGCCATCTCCCTCATTGGGATTCTTTTCTCTgGCAAAAGCTCCCAGTTCATATAGCCAATTACAGAAAAGTTCTAGACCTTGCAAACCTGCTAAGAGTAACATTTCTAAATTACAGAATTTACAAAGAAATTCTGTTAATGAGGCAAGACTACCACATGCACCTGGGACAAGGTCTCAAATTGTCAAAGGAGCAGCAGAGAATTGCACTGAGGAATTAAGCCTTTTAGATGTAAAGTCAGAACCAAGCATGCAAGTGGATAATAAGCAGATGGCCGGTGCTGAAGTGGAATATAATTCTATAGGTTCTGAAACAATAACCAAGCAAGAAAAGGTTGAAAACATTCTTGAACATGTCGACATAAAATCTAAGGAACAAGGAGAACTACATAGAAGTGAGAATGCTTCTAGCGTGGAGGATGTGGTATTCCCTAGACATGAAAAGAAGCTTCTTTCAAAGAGTCATACCCAAGAGCAGTTGGAGAAAGAGGCTGATCACCCTGATGTTTTGTCAAATGGGTATCAATCTGTATTTCAGGAACCACAGTCTATGCAATATCATGGCATGCAGAGAATTTCAATAGTGAAAGGTAGTATTTCAAATACTGTGCATAATGCCATGGGACAAGATGAAGATGAACAACTCAAACTGCTTGCTTGTGATGTTCTTACTTCTGATGAAAGTTTGGTGCTACAGGCGAAGCGTGGCGCTTCTTTAGAGGATGGTAGACTTTCTGGAGATTTCAAGGAATACAATAGTGTCAAGACTGCACTTTTGGATTCTAGTCTTGCTGATTTTAGTGAAACTGTTTTGGGAGGATCTATACAAGAAATCCCCTTTAAGAATACTGAACAGGTAAATGATAGTGCTGCTGATTTTGTTACAAGTGGAGGAGATGCACAAGTGCATTTATTGAATGGGAATCTCTCATACAATTGCAATGAAACCACTGAAAGTAATTTAGAGGCAGTTAATCAGCAGTTACAGGGGGAACTCATGACTACAAGTGCTAGTATTGTAGGAGAAATTAGttcaacaaaagaaaatgaatctCATGTAAATAGTTGTCAGCTAGTTCATATGACAACCTTATCTTCCGAAGGTTCTCCTCAGAAGTCTATACCAGAAATCAACTGTCCTGCTGAAAGTGAAACCAAAATAGCTGAAATTGAAGACTGCCGGTTTCCAGTAGATGATCAATCAGGTTTCATTCAGACAAGACCAGTGTTGGAAGGATGTGAGAAGGTTATTGACTCAAAAGCAATGCATGATGATACTCAAGCGTTTGAATTAGATAGGATGGGGGAAAATTGCATAGCTGTTTCTGCAATTGCTTGCAACACTAAGGTAAGCAATATTTCTCAGGAAAGCAGACCTTTTCATGAGAATAATGTAGAGAATCTCCACTTTAAATCCCAACTATGTCCAATAGTAAAAGCTGATTTTGATTCCAGTGAAAATGAAGTATCAACTAATAACTGCTGTATGATTTCTGAGTTGCAGCTTAGAGATGAGGGTTCTTCTAGGGATGCTTCAATGCACTATGATGTTCCATGTGATGTCCCTGGAAACTTTGAGCAACAAACTAGCATGATTACATATTCTAAAGCTAACAAAATGCTTTGTGAAGATGAGAGTTTAGTGCCAAATCATGGTCACTTGCTTGATCAGAGTGAATTTTCTGAAGTATCTGCAGACTTCATTTCAAACGCCAGAGATTCTATCGATAATGGAGCTGAAAAATCCTCTGGCTGTTTGCAACATACACTATTGGCTCAGTTAGTCCGAGAAGTTGATCACACTAATGGAGAGATTGAAGAATCACATATGGAAGATGCACAAGTGCAGTCGTTCAATGAAAATCCAGTGGCATACAATTGCAACAATTCCGAGAATGCTAATAACATACTACACTTGGATGGTGACTGGCTGCCCACAAATATTGCTTCtgaagaaatcaagaaaacaGTGGAAGATGCACAAGTGCAGTTGTTTAATGAAAATCCAGCGGCATACAACTGCAACAGTAAACAATGCCTTGTTGTTACTAATGATAAGTTTCCATTAGCAGATAACAATAACATAAACGAAGATTCTCATCTTTCGGATTTTCAAAGGCCTGGTGCTGTTGGTGGTGTAGGTTCGGAGAATGTTAATACCATACACTTGGACGGTGACTGGCTGCCCACAAATATTGTTTCTTCtgaagaaatcaagaaaacaaatttatttgagAGTGCTTTAGAAGGATGTGATATCTATACAAGTGAGCACAATGCTTCCACTCATCATATTCAGGCTATGGCTGAAATGAAAGATGGAACTATTGAGGTGGATGAAAGGGCAGAGCTTTTGCAAATGGATGATTCAAAAGGTTCTTTTGACGTATTGCCattagttgaagttcaactcaATGACAACATTATATCTTCTGAATGCAATTCTTCTATAGAAGTGACCAAAGATTCTTTTACAGACGTAGTTACTTGGAAATCTGAGGAGCATTGTTCTTTAAGTGAAAGTTCAAACTTACCAGCTTCAGATAATCTAACCTTCAACACAACAATTCCACAGGCCTGTGAAGTTAGTTCATCGAACAGTAAAAGTTTTTCAGATGAAGCTGAAACTGATATCTTTGAGAAAGATGAGTTTCCTAATATCGACATGCAGCATCAGTCAAAAGGTGGCATTTATTTTGCGGAAGACAGCagcaaaataattcatttGCAGATATCTGTGACTAAAAGCAAGCAGGAAGTTCCTACAGTGAAGCCTGTACCAAATGCTGCTCCGTTTGCTGATGAACGGTTAGCTGCAATTGAAGATGCTGGAGAGTTGAATCAAAATTCCCCCCATGGAGATTGGCAAGAAACTGTCTCTGCAACTGCTTGCGACACTAAGCTTAGAGATGATGGTTCTTCTAGGGATGCTTCAATGCACTATGATGTTCAGTGTGATGTTCCTGCAAACTTGGAGCATCAAAATAGCATGATTACATATTCTAAAGCTAATGAAATGCTTTGTGAATATGAGAGTTTAGTGCTAAATCGTGATCACTTGGTTGATCAGAGTGAATTTTCTGAAGTACCTGCCGATTTCATTTCAAACACCAAAGATTCTATTGGTAGTGGAGCTGAAATACCCGCTGGCCATTTACAACATACACTATTGGCTCAGTTTGTCCAAGAATTTGATCACACTAACAGAGAGATTGAGGAATCATATATGGAAGATGCACAAGTGCAGTCATTTACTGAAAATTCAGTGGCATACAACTGCAACAGTAAACACTGTCTAGCTGTTACTAATGAAAAGTTTCCATCGGCcgataacaataatataaatgaagatTCTCGTCTTTCTGATTTCCAAAGGCCTGGTGCTGTTGTTGGTGTAGATTCCCAGAAATTTGATAACATAGTGCACTTGGATGGTGATTGGCTGCCCACAAATATTGCTTCTTttgaagaaatcaagaaaacaaATTCATCTGAGGATGCATTAGAAGGATGTGATATCGATACAAGTGAGCACAAAGTTTCCAATCATCATATTCAAGCTATGCCTGAAAACAAAGATGGAAATCTTGATGTGGATGAAAGGGAAGAGCTTCTGCAAATGGATGCTGCAAAAAAAGGTTCTTCAGACATATTGCCattagttgaagttcaactcaATGATAAAGTTGTATCTTCTGAATGCGATTCTTCTATAGAAATTAGCAAAGACTCCTTTACAGACGTAGTTGCTTGGAAATCTGAGGAGCATTGTTCTTTAAGTGAAAATTCAAACTTACCAGCTTTAGATAATTTAACCTTCAACACAAGAATCCCACAGGTCTGTGAAGTTAGTTCATTGAACAGTACAAATCTTTCAGATGAAGCTGAAACTATCTTTGAAAAAGATGAATTTCCTAATTCCAACATGCAGCACCAGTCTAAGGGCGACATTTATTCTGCAGAAGACAGCagcaaaataattcatttGCAGAAATCTGCTACTAAAAGCAATCAGGACTTTCCTACAGTGAAGCCTTCACCAAATGCTGCTCCATTTTCTGATGAATGGTTAGCTGCAATTGAAGCCGCTGGAGAGGAGATTTTAACGATGAAAAGCGGTGCTGTACAAAATTCTCCCCCGGACAAGCCTCAGCATGAACCAGGTCCTTGGTCCCCGGTGAGACGTAAGAATCAATCGATTGGACCCTTTGATTGTACCAAACACAATATCCAGCATTCCAGTTCATAA 7782 0.3959 MDQFIENLPPMDLMRSEKMTFVQLIIPAESAHRAITYLGQLGLLQFRDLNAEKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSHSILQSDIYLEDLEIQLAEHEHELIEMNSNSEKLRQSYNELLEFKIVLQKACGFLVSSRGNAVSEERELEENVFSNGDYVETPFLFEQEMRPAPSNQSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPADEQIMDPISTEMVEKTVFVVFFSGEQARTKILKICDAFDANCYPVPEDITKQRQITTEVSSRLADLEATLDAGIRHRNKALALVGGHLTKWMDMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPIFAKTQIQEALQRATFDSNSQVGIIFHSMDAQESPPTYFRTNSFTSPYQEIVDAYGVARYQEANPAVYTTMIFPFLFAVMFGDWGHGICLLLGALVLIARQSKLSTQRLGSFMEMLFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTTGLVKYREPYSFGVDPSWRGSRTELAFLNSLKMKMSILFGVVHMNLGIILSYFNAHFFGNSLDIRYQFVPQMIFLNSLFGYLSLLIVAKWCSGSQADLYHVMIYMFLSPFDNLGENQLFWGQRPLQVVLLLLAVIAVPWMLLPKPFILKKLHNERFQGRTYGVLNTAEVDLELDPDFARQHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWRRSDIMDSISNLPLLEIAEEDDSLLFDVSTATANVFACSPLLPLRSNPPQTEGRVGGAAVDSENPSSSLNENANKENADCNKPQKLSVEPQQMKRKKKGGGYNLRKSLAWDRAFFTEQGVLNPVELSMISGTATPKAGLNLEVIHEEESVGTSIELQEIEEDLFMHSSDAVPVEDRMIGATAGLSPKPGALPKASLAAAFLAARKVLTVNDSAGNRSKRSACPQLQAKRKVLTVNDSVGNRSKRSACQRLPVASSSYPCHYLIPGPTTTARSGMLTTGSLKRNHNAHPATNLQKYAGVKGPSKNPKTVPSNPKFCLGDKCSVTRTLTKQAGKHLDNSVSETHPPSRVLQSGTEAKNKVSEACLPQGVSDIGEKKQQTRLQTTKSSGLRMPSPSLGFFSLAKAPSSYSQLQKSSRPCKPAKSNISKLQNLQRNSVNEARLPHAPGTRSQIVKGAAENCTEELSLLDVKSEPSMQVDNKQMAGAEVEYNSIGSETITKQEKVENILEHVDIKSKEQGELHRSENASSVEDVVFPRHEKKLLSKSHTQEQLEKEADHPDVLSNGYQSVFQEPQSMQYHGMQRISIVKGSISNTVHNAMGQDEDEQLKLLACDVLTSDESLVLQAKRGASLEDGRLSGDFKEYNSVKTALLDSSLADFSETVLGGSIQEIPFKNTEQVNDSAADFVTSGGDAQVHLLNGNLSYNCNETTESNLEAVNQQLQGELMTTSASIVGEISSTKENESHVNSCQLVHMTTLSSEGSPQKSIPEINCPAESETKIAEIEDCRFPVDDQSGFIQTRPVLEGCEKVIDSKAMHDDTQAFELDRMGENCIAVSAIACNTKVSNISQESRPFHENNVENLHFKSQLCPIVKADFDSSENEVSTNNCCMISELQLRDEGSSRDASMHYDVPCDVPGNFEQQTSMITYSKANKMLCEDESLVPNHGHLLDQSEFSEVSADFISNARDSIDNGAEKSSGCLQHTLLAQLVREVDHTNGEIEESHMEDAQVQSFNENPVAYNCNNSENANNILHLDGDWLPTNIASEEIKKTVEDAQVQLFNENPAAYNCNSKQCLVVTNDKFPLADNNNINEDSHLSDFQRPGAVGGVGSENVNTIHLDGDWLPTNIVSSEEIKKTNLFESALEGCDIYTSEHNASTHHIQAMAEMKDGTIEVDERAELLQMDDSKGSFDVLPLVEVQLNDNIISSECNSSIEVTKDSFTDVVTWKSEEHCSLSESSNLPASDNLTFNTTIPQACEVSSSNSKSFSDEAETDIFEKDEFPNIDMQHQSKGGIYFAEDSSKIIHLQISVTKSKQEVPTVKPVPNAAPFADERLAAIEDAGELNQNSPHGDWQETVSATACDTKLRDDGSSRDASMHYDVQCDVPANLEHQNSMITYSKANEMLCEYESLVLNRDHLVDQSEFSEVPADFISNTKDSIGSGAEIPAGHLQHTLLAQFVQEFDHTNREIEESYMEDAQVQSFTENSVAYNCNSKHCLAVTNEKFPSADNNNINEDSRLSDFQRPGAVVGVDSQKFDNIVHLDGDWLPTNIASFEEIKKTNSSEDALEGCDIDTSEHKVSNHHIQAMPENKDGNLDVDEREELLQMDAAKKGSSDILPLVEVQLNDKVVSSECDSSIEISKDSFTDVVAWKSEEHCSLSENSNLPALDNLTFNTRIPQVCEVSSLNSTNLSDEAETIFEKDEFPNSNMQHQSKGDIYSAEDSSKIIHLQKSATKSNQDFPTVKPSPNAAPFSDEWLAAIEAAGEEILTMKSGAVQNSPPDKPQHEPGPWSPVRRKNQSIGPFDCTKHNIQHSSS 2593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2555 2593 PANTHER VACUOLAR PROTON ATPASES 5 791 IPR002490 GO:0033179|GO:0046961|GO:1902600
Ssu3g2555 2593 Coils Coil 99 126 - -
Ssu3g2555 2593 Pfam V-type ATPase 116kDa subunit family 37 790 IPR002490 GO:0033179|GO:0046961|GO:1902600
Ssu3g2555 2593 PANTHER VACUOLAR PROTON ATPASE A1 5 791 - -
Ssu3g2555 2593 MobiDBLite consensus disorder prediction 1121 1146 - -
Ssu3g2555 2593 MobiDBLite consensus disorder prediction 851 878 - -
Ssu3g2555 2593 MobiDBLite consensus disorder prediction 1121 1147 - -
Ssu3g2555 2593 MobiDBLite consensus disorder prediction 2547 2593 - -
Ssu3g2555 2593 MobiDBLite consensus disorder prediction 837 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2555 Ssu-Chr3 78244646 78267161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2555 1 790 Primary Pumps ATPases(2) AT2G28520 79.723 0.0 1310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2555 K02154 - gmx:100786845 1491.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2555 3 78244646 78267161 Ssu3g2555 3 78244646 78267161 ECH