Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2550 ATGGGGAAGACACGTGGTATGGGAGCTGCGCGCAAGTTGAAGTCCCACCGAAGAAGACAGAGGTGGGCTGACAAAGCATACAAGAAATCACATCTGGGAAATGAATGGAAAAAGCCATTTGCTGGATCGTCTCATGCAAAAGGCATTGTTCTTGAAAAAATGTTAGCCtaa 171 0.4561 MGKTRGMGAARKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKMLA 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2550 56 MobiDBLite consensus disorder prediction 9 25 - -
Ssu3g2550 56 MobiDBLite consensus disorder prediction 1 28 - -
Ssu3g2550 56 PANTHER 40S RIBOSOMAL PROTEIN S23 1 54 - -
Ssu3g2550 56 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 54 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2550 Ssu-Chr3 78186105 78187343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2550 1 54 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 87.037 1.46e-28 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2550 K02973 - rcu:8263368 114.39