Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2529 ATGGGCCGTGTCcgctgtttgttttgttttgatcttAATATCTATAATCATCGAGCACATCATCCATCTCATAGGAAAGTGGTTGAAGAAGAAGCACAAAGAGCTCTGTACGAGTCACTTGAAAAGATCAAATCAGAGCTTATGTTACTAGGGTTCCTATCGTTGCTTCTAACGGTAGGTCAAGGTCTAATATCAAGGATATGTATATCAGAAAAAATTGCAGGGACATGGCACCCCTGCAGCGAGGATGAGAGTAGCACCCACGAGTCAGATAGTGAAGAATCAGAAGACGGAACCAACAGTCACAGGTTGTTAGCAGCGTTTTATGGCTCAGACGGGGTAAATCCGCGACGTGTTTTGGCGGGAGGAGGAAGCGACAAGTGTGGTGAGGGTAAAGTCCCGTTTGTGTCATCGGATGGCATTCATCAACTCCATATATTTATCTTCGTGCTGGCAGTTTTTCATGTCCTTTACTGCATTATCACTATGGCTCTGGGCAGAGCAAAGATGAAAAGGTGGAAGCGATGGGAAGAGGAAACCAAGACACATGAGTACCAATTTTCACACGATCCTGAGCGATTCAGATTTGCGAGGGAGACGTCGTTTGGAAGAAGGCACTTGAGTTTCTGGACCAAAAATCCTGTCCTCATGTGGATTGTTTGTTTCTTTAGGCAGTTTGTGCGGTCAGTTCCAAAAGTGGATTACTTGACCTTGAGACATGGATTTATCATGGCACATTTGGCTCCTCAAAGTCACTCGAAATTTGATTTTCGGAAATATATAAAACGATCACTGGATGAGGATTTCAAAGTCGTTGTTGGAATCAGtcCACCATTCTGGTTCTTCGCAGTGATCTTTCTCCTCTTGAACACTCATGGCTGGTACTCGTATCTGTGGCGGCCATTTATTCCTTTGATTATCATCCTGTTAGTGGGAACCAAGCTGCAAGTGATCATAACCGAGATGGGACTTAGAATTCAACAAAGAGGAGAGGTCCTGAAGGGCGTGCCGTTGGTACAGCCAGGGGATCACTTGTTCTGGTTTAATCGACCAGGCCTTATTCTTAACCTCATCAATTTTGTGCTCTTTCAGAATGCTTTCCAGCTGGCTTTCTTTGCGTGGTCTGCGCTACAATTTGGGATTAAATCCTGTTTCCATTCGCATACGGAGGATGTGGTGATCAGAATCACAATGGGGGTCCTCATTCAAATCCTCTGCAGCTATGTTACTCTTCCTCTCTATGCTCTAGTGACACAGATGGGTTCGACGATGAAGCCAACAATTTTCAACGAGAGAGTAGCGGGGGCTCTGCGAAATTGGCACCAGACTGCGAAGAAGCACATAAGACAGAATCGTGTGGGCCCGTTATCCTTGTCGGGGACCCCAGCGTCGAGCAGACCCACAACCCCAAGTCACCACATGTCCCCACTGCACCTCTTGCGATACTACCGTTCCGAAATCGATAGCTTCCCTGCGTCTCCACGAAGGTCAAACTTCGACGCAGACCAGACCCAGCCCTGGGATATGGAGTCTCCTTCCCCTTCCTACTCGCACCACCACGAAATGGAAATGGGTCACTTGCCCCGTGATCAGCAACAGACCAACAATGACCCCATATTGGGTGGTAACACAACCCACCATGAGATTGTTGTAGCACACAGCAAGGaattttcatttgataaaaGACCTACCGGTAATTCgtaa 1704 0.4595 MGRVRCLFCFDLNIYNHRAHHPSHRKVVEEEAQRALYESLEKIKSELMLLGFLSLLLTVGQGLISRICISEKIAGTWHPCSEDESSTHESDSEESEDGTNSHRLLAAFYGSDGVNPRRVLAGGGSDKCGEGKVPFVSSDGIHQLHIFIFVLAVFHVLYCIITMALGRAKMKRWKRWEEETKTHEYQFSHDPERFRFARETSFGRRHLSFWTKNPVLMWIVCFFRQFVRSVPKVDYLTLRHGFIMAHLAPQSHSKFDFRKYIKRSLDEDFKVVVGISPPFWFFAVIFLLLNTHGWYSYLWRPFIPLIIILLVGTKLQVIITEMGLRIQQRGEVLKGVPLVQPGDHLFWFNRPGLILNLINFVLFQNAFQLAFFAWSALQFGIKSCFHSHTEDVVIRITMGVLIQILCSYVTLPLYALVTQMGSTMKPTIFNERVAGALRNWHQTAKKHIRQNRVGPLSLSGTPASSRPTTPSHHMSPLHLLRYYRSEIDSFPASPRRSNFDADQTQPWDMESPSPSYSHHHEMEMGHLPRDQQQTNNDPILGGNTTHHEIVVAHSKEFSFDKRPTGNS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2529 567 MobiDBLite consensus disorder prediction 82 98 - -
Ssu3g2529 567 MobiDBLite consensus disorder prediction 451 474 - -
Ssu3g2529 567 Pfam Mlo family 26 483 IPR004326 GO:0006952|GO:0016021
Ssu3g2529 567 MobiDBLite consensus disorder prediction 496 512 - -
Ssu3g2529 567 PANTHER MLO-LIKE PROTEIN 1 26 535 IPR004326 GO:0006952|GO:0016021
Ssu3g2529 567 MobiDBLite consensus disorder prediction 454 472 - -
Ssu3g2529 567 MobiDBLite consensus disorder prediction 528 542 - -
Ssu3g2529 567 MobiDBLite consensus disorder prediction 493 521 - -
Ssu3g2529 567 MobiDBLite consensus disorder prediction 528 547 - -
Ssu3g2529 567 PANTHER MLO-LIKE PROTEIN 26 535 - -
Ssu3g2529 567 MobiDBLite consensus disorder prediction 78 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2529 Ssu-Chr3 77851067 77861721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2529 29 533 MLO family AT2G39200 58.523 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2529 K08472 - gmx:100782431 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2529 3 77851067 77861721 Ssu3g2529 3 77851067 77861721 ECH
Ssu8g0546 8 8822591 8851594 Ssu3g2529 3 77851067 77861721 ECH
Ssu4g1037 4 16652965 16661254 Ssu3g2529 3 77851067 77861721 ECH
Ssu8g0546 8 8822591 8851594 Ssu3g2529 3 77851067 77861721 PCT