Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2475 ATGCTCAACTCCGACGCCGCCTCCTCGCCGCTGGCCACCCTCGACGGCGGATCGTGCGGCCTCATGGTTCCCTCTCCCAGCGAGCCGTGCAAGATCGAGATGTACTTGCTCGCCTTCTACGCCGCCTGCATCGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGACCTAGTCAAGTGTAATATACAGATTGACCCTGCTAAGTACAAGAGCATCTTGTCAGGTGCCCAGGGTGCTTGCAAATTTGGATTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCAAGCAAGTACAAGACCTTGATCTACTTTGCTGGTAGTAAGCTTGGGTAA 369 0.5312 MLNSDAASSPLATLDGGSCGLMVPSPSEPCKIEMYLLAFYAACIAGGILSCGLTHMAVTPLDLVKCNIQIDPAKYKSILSGAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYFAGSKLG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2475 122 PANTHER OS06G0210500 PROTEIN 82 119 - -
Ssu3g2475 122 PANTHER OS06G0210500 PROTEIN 9 81 - -
Ssu3g2475 122 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 82 119 IPR044677 GO:0005315|GO:1990547
Ssu3g2475 122 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 9 81 IPR044677 GO:0005315|GO:1990547
Ssu3g2475 122 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 121 IPR018108 -
Ssu3g2475 122 Gene3D Mitochondrial carrier domain 36 119 IPR023395 -
Ssu3g2475 122 SUPERFAMILY Mitochondrial carrier 41 119 IPR023395 -
Ssu3g2475 122 Pfam Mitochondrial carrier protein 41 77 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2475 Ssu-Chr3 76713077 76713521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2475 21 119 Chloroplast and Mitochondria Gene Families AT5G14040 64.000 1.07e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2475 K15102 - gmx:547633 175.637