Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2469 ATGTCGAAGCCATCCGTGGAGGATCTGGCCCTGGGAAGTGATGCAAGATTTGATGTCCTGAAGTATATCGAAAGGTCACTTGAGGAGGATTTTAAAGCTATTGTGGGAATAAGGGACGCTGATTGGAATGGGGCTTTCAATTTCACCAAAGATCTTACCTTTTTGACCATGTGTGCCAAACAAATGAAAGGAGACATTACACAACACATGTGCACAGCAGGGGAAATGGAAGCTTATGCCCAAAGTTTTGCAAATGGGAACAAGTCAGGAACCAAATCCAACTTCTTGAAGCCcaatataaattgtaatttgagCTCATGGGTTGATGGTTGCGAACCCGGATGGGGTTGTAAAGCCAACCAAAAAGTAGACATCAATAGTAAGAAGAGGGATATGCCTACTAGATCTCTTGAATGCCAACCTTGTTGTGAAGGTTTCTTTTGTCCTCGTGGTCTCACTTGCATGATACCTTGCCCACTGGGCTCTTATTGTCCACGTGCACAACTCAATAAAACTAGTGGAGTATGTGAACCATATCGTTATCAGCTACCTCCTGGAAAGCCTAACCATACCTGTGGTGGGGCAGATATTTGGGCAGATATTACAAGTAGCAGCGAGGTATTCTGTTCAGCAGGGTCATTTTGTCCATCTACAATCGTAAAAAATCCTTGCAATAAGGGGTATTATTGTAGAAAAGGTTCTACTGCTCAGGAGCGGTGTTTCAAGTTGGCAACTTGTGAGCCTAAGTCAGCAAATCAAAATATTACTGCATATGGGGTCTTGGTTTTTGCCGGCTTGTGTTTTTTGCTTATTATCATATACAATTGTTCTGACCAAGTTCTTGCAACTCGGGAAAGAAGACAAGCAAAGTCAAGAGAAAGAGCTGCTCAAAGTGTAAGAGAATCACAAGCACGTGAAAAATGGAAATCTGCAAAAGATATTGCCAAAAAGCATGCAGTAGATCTGCAATCACAATTATCACGTACATTTTCTCGCAAAACTTCAAAAAAGCCAGATTTGAAAGGTTTTGGTTCTAAACATTCCGATTCTGCCTTACCACCTACGGCACCAGGAGGTATTGGTacatcaaaaggaaaaaaaaaggacaaaaacaacctctcaaaaataataaatgatattgaGGAAAATCCTGATAATCCAGAAGGGTTTAATGTTCAGATAGgtgataaaaatgtcaaaaagcAAGCACCAAGGGGTAAGCAATTACATACTCAAAGTCAAATTTTCAAGTATGCATATGGTcagattgaaaaagaaaaggctttacaagaacaaaacaaaaacttaaccTTTTCTGGAGTAATTTCAATGGCCAGTGATATTGATATAAGAAAGAGACCTACCATTGAGGTTGCTTTTAAAGATTTAACCCTCACTTTGAAAGGGAAAAAACAAACATCTATTGAGATGTGTGACTGGTAA 1443 0.3687 MSKPSVEDLALGSDARFDVLKYIERSLEEDFKAIVGIRDADWNGAFNFTKDLTFLTMCAKQMKGDITQHMCTAGEMEAYAQSFANGNKSGTKSNFLKPNINCNLSSWVDGCEPGWGCKANQKVDINSKKRDMPTRSLECQPCCEGFFCPRGLTCMIPCPLGSYCPRAQLNKTSGVCEPYRYQLPPGKPNHTCGGADIWADITSSSEVFCSAGSFCPSTIVKNPCNKGYYCRKGSTAQERCFKLATCEPKSANQNITAYGVLVFAGLCFLLIIIYNCSDQVLATRERRQAKSRERAAQSVRESQAREKWKSAKDIAKKHAVDLQSQLSRTFSRKTSKKPDLKGFGSKHSDSALPPTAPGGIGTSKGKKKDKNNLSKIINDIEENPDNPEGFNVQIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMASDIDIRKRPTIEVAFKDLTLTLKGKKQTSIEMCDW 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2469 480 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 30 473 - -
Ssu3g2469 480 MobiDBLite consensus disorder prediction 325 371 - -
Ssu3g2469 480 MobiDBLite consensus disorder prediction 290 311 - -
Ssu3g2469 480 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 30 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2469 Ssu-Chr3 76603673 76612366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2469 8 48 MLO family AT1G61560 63.415 4.10e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2469 - - gmx:100809312 790.415