Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2456 ATGGCTGCGGAACCCAAGGAATCACCTGCCAACAACCCCGGCCTCCATGCAACTCCTGACGAAGCTACCAAGGGTTACATCATGCAACAAACTATGTTTAGAATCAAAGACCCCAAAGTGAGCCTTGATTTTTATTCTCGCGTCTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCAGAGATGAAGTTCAGCCTGTACTTTATGGGCTATGAGgATACGACACAAGCTCCAAGTAATCCAGTTGATAAAACGGTTTGGACCTTTTCTCAGAAGGCTACAATTGAACTGACACATAATTGGGGTACCGAAAGTGATCCGGAGTTCAAAGGGTACCACAATGGCAATTCTGAACCTCGTGGCTTTGGACACATTGGCATAACTGTTGATGACACCTACAAGGCATGTGAAAGATTTCAGAATCTGGGAGTTGAGTTTGTTAAGAAACTAGAGGATGGGAAAATGAAAGGTATAGCATTTATAAAGGATCCTGATGGATACTGGATTGAAATCTTTGATCGAAAGACAATAGGAAATGTAACACAAACTGCTGCTTAG 558 0.4247 MAAEPKESPANNPGLHATPDEATKGYIMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTQAPSNPVDKTVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGITVDDTYKACERFQNLGVEFVKKLEDGKMKGIAFIKDPDGYWIEIFDRKTIGNVTQTAA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2456 185 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 30 171 IPR004360 -
Ssu3g2456 185 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 18 174 IPR029068 -
Ssu3g2456 185 ProSitePatterns Glyoxalase I signature 2. 115 131 IPR018146 GO:0004462|GO:0046872
Ssu3g2456 185 Gene3D - 5 181 IPR029068 -
Ssu3g2456 185 MobiDBLite consensus disorder prediction 1 21 - -
Ssu3g2456 185 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 27 174 IPR037523 -
Ssu3g2456 185 TIGRFAM glyox_I: lactoylglutathione lyase 16 179 IPR004361 GO:0004462|GO:0046872
Ssu3g2456 185 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 3 181 - -
Ssu3g2456 185 ProSitePatterns Glyoxalase I signature 1. 30 51 IPR018146 GO:0004462|GO:0046872
Ssu3g2456 185 CDD GlxI_Zn 28 172 - -
Ssu3g2456 185 PANTHER LACTOYLGLUTATHIONE LYASE 3 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2456 Ssu-Chr3 76280612 76285693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2456 1 185 Calmodulin-binding Proteins AT1G08110 82.703 3.41e-109 310
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2456 3 76280612 76285693 Ssu3g2456 3 76280612 76285693 ECH