Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2444 ATGTTGTTATTGTTGGTTTCATCGTTTGCTGGCTATGGAACAAACGTGACAGTAGTGGACAATTTGGGACAAATCAGCACGTCTCTAGGATACGCTGGCAACACAGCGAGGGCATTTGTGTCACTTGCAAGCATTTGGAATTACTTTGGGAGGGTCTTGGCTGGTTTCGTGTCTGAAATTTTGCTTCAGAAGTACAAAGTTCCCCGCCCTTTATTTTTGACCTTTTCGCATTTCGTTACATGCATTGGTCACCTTCGTATTGTGTTCCCAGCGCCCGGTTCAGTCTATTTTGCATCAGTGATAATTGGATTTTCCTTCGGCATAATATGGCCAATGTTCTATGCACTTGTTTCTGAACTCTTCGGTCTTAAATATTTTGCCACACTGCAGAATTGTGTCCTTATGGTAATTCCCTTTGCATCATATCTGCTAAATGTCGTGGTGACTGGCTTCTTTTACGATAAAGAGGCAAGAAATCAGCTCGAAAAAAGTGGCAAAGAACGGGTGAAGGGAATGGAGTTGACTTGTATTGGAACCGAATGCTACAAGCTTCCTTTAATAATAATGGCATGCGTCTCTTTTCTCGCAGGAGTGACTTCTTTGATTTTTGCCATAAGGACCAGAAAGTTCTACAAAAGTGACATATACAAGAAGTTCATAGAGGAAGCCCCTACCAATGAAACGGAGTTAATTGCACCCTCGGTTCGTGATTATGATGAGGGAGTGATTAATGGTGGTGGTAAACGTTGA 750 0.4227 MLLLLVSSFAGYGTNVTVVDNLGQISTSLGYAGNTARAFVSLASIWNYFGRVLAGFVSEILLQKYKVPRPLFLTFSHFVTCIGHLRIVFPAPGSVYFASVIIGFSFGIIWPMFYALVSELFGLKYFATLQNCVLMVIPFASYLLNVVVTGFFYDKEARNQLEKSGKERVKGMELTCIGTECYKLPLIIMACVSFLAGVTSLIFAIRTRKFYKSDIYKKFIEEAPTNETELIAPSVRDYDEGVINGGGKR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2444 249 Gene3D MFS general substrate transporter like domains 1 212 IPR036259 -
Ssu3g2444 249 SUPERFAMILY MFS general substrate transporter 2 210 IPR036259 -
Ssu3g2444 249 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 1 227 - -
Ssu3g2444 249 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 1 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2444 Ssu-Chr3 76101246 76101995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2444 1 236 Nodulin-like Gene Family AT2G28120 56.356 5.00e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2444 - - gmx:100799928 400.979