Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2388 ATGGGATTCAGGTTTCTGACAACTGTTCTTCAGATTTTTCGATTTTGTATATCTAAATGCCacaaaaactttaaaatgaaGAGGAACCCTCGGAAAGTAAAATGGACAAAGGCATATAGGCGAGTGCATGGAAAGGATATGACACAGGTAAAGCTTCAGCATTGTTATATTTACAGGTTGTTTCAGGATTCAACCTTTGAGCTTGAGAGAAAGCGAAACAGGCCTGAGAGGTATGACAGGAATCTTGCTGAGAATGTCCTCAAGGCCATTCCAAAGATCGATAAAATCAGAGTCGACAGGGAGGAGAGATACCATAAGAATAGGATGAAAGGCAAGAAGCAGAAGCTGCAGATGGAGGCAGCCAGGGAGTTGGAGCAGGGTATCAGTCTGGTCAAAGCTCCATCTGTGCTTCAAAAGGACCCTTCTCTCACTTTAGCCAAGATCAAAGTTGGGGTTTCCCAACAACAATCAGAGGACAATCATCCCATGGAAGAGTGA 498 0.4257 MGFRFLTTVLQIFRFCISKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQVKLQHCYIYRLFQDSTFELERKRNRPERYDRNLAENVLKAIPKIDKIRVDREERYHKNRMKGKKQKLQMEAARELEQGISLVKAPSVLQKDPSLTLAKIKVGVSQQQSEDNHPMEE 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2388 165 Pfam Ribosomal protein L24e 2 49 IPR000988 -
Ssu3g2388 165 PANTHER BNAA04G10330D PROTEIN 2 165 - -
Ssu3g2388 165 PANTHER 60S RIBOSOMAL PROTEIN L24 2 165 IPR000988 -
Ssu3g2388 165 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 2 40 - -
Ssu3g2388 165 Coils Coil 106 126 - -
Ssu3g2388 165 Gene3D Ribosomal protein L24e 1 52 IPR038630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2388 Ssu-Chr3 75072216 75072830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2388 2 165 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 53.049 1.32e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2388 K02896 - gmx:100793564 269.626