Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2381 ATGATGGATGCTGGATTACTCAATGAAGTCTATGACATTTACAGTTTGAATGCAGATTATACTAGAGGTTTGCGGCAAGCCATTGGTGTCCGTGAATTTGAGCCTCTTCTTAGAACTTGTATTGTCAAAGACGTGTATGAAAGAGAGAGGGAATTGATTGAAGGATCCAGCATAGAAAAGGGCGAGACATTATTTAATGGTAATTTGATGGAATTGGTGAGATCTTCCTCTAATACTGAATACACGAATCTTTTGGAAGAAGCAATAGAAAAAGTAAAGGTTAATACCCGGAGACTTGTTTGTCGTCAGAAGAGGATGCTCAGTCGACTGCAAACACTCTTTGGTTGGAACATACACTATGTTGATTCCACAGAATCAATATCAAgcAAATCAGAAGATGTATGGACTCGCCAAGTGGTTGAATCTGCCGTGAAGATAGTAAAATCTTTCCTGAGTGAGAATGGAAGCTTGTCATCCACCTTTGGGACGTCAAATGACACTGGGATGAAAATAATCCAAAGGGACCTTTGGACTCAATATATATGCAAGGCCTGTGGAGATCGGGTGCTTAGAGGATTACATGAATGGGAACAACACAGACGAGGTCGTGGGCACCGAAAACGTACTTCTCGTCTCAAGAGCAAGGCGCAAGATCCTGGTTTCGCGGAAGAGAATGTGGAGTGTTCCGAGTGTGAACAGTGA 702 0.4202 MMDAGLLNEVYDIYSLNADYTRGLRQAIGVREFEPLLRTCIVKDVYERERELIEGSSIEKGETLFNGNLMELVRSSSNTEYTNLLEEAIEKVKVNTRRLVCRQKRMLSRLQTLFGWNIHYVDSTESISSKSEDVWTRQVVESAVKIVKSFLSENGSLSSTFGTSNDTGMKIIQRDLWTQYICKACGDRVLRGLHEWEQHRRGRGHRKRTSRLKSKAQDPGFAEENVECSECEQ 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2381 233 Gene3D - 1 175 IPR027417 -
Ssu3g2381 233 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 155 IPR039657 -
Ssu3g2381 233 Pfam IPP transferase 1 105 - -
Ssu3g2381 233 Gene3D Classic Zinc Finger 176 220 - -
Ssu3g2381 233 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 1 155 - -
Ssu3g2381 233 MobiDBLite consensus disorder prediction 200 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2381 Ssu-Chr3 74965638 74967662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2381 1 214 C2H2 Transcription Factor Family AT2G27760 50.467 2.00e-62 200
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2381 3 74965638 74967662 Ssu3g2381 3 74965638 74967662 ECH