Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2370 atgagTTTTGAAGGTTTTCTATCTCTTCAATCCATGTCTGCTACCTGCGGGTTCTTGTTCTTCTCCTTCACCCTTCTATTCTCGTTCTTCTCGTTCCTCGTCTTCATCTCGAGGATGAAACCATGGTGTAACTGCGACATTTGCAAGAGCTACTTGACCGCGAGCTGGTCCAGCAAGTTCCCCAACCTCTGCGACTGGTACACTCACCTTCTGCACAAATCCCCAACGGGGACAATCCGCGTGCACGTGTTGGGGAACACCATAACCTCAAACCCGGACAACGTGGAGTACATTCTGAAGACGAATTTCCAAAACTACCCCAAGGGGAAGCCCTTCTCCGCCATCCTCGGCGATCTCCTCGGCCGAGGAATCTTCAACGTCGACGGCGAGTCGTGGAGGTTCCAGCGCAAGATGGCGAGCCTAGAACTCGGGAGCGTCGCGATTCGCTCCTACGCGATGGAGCTGGTCAACGAGGAGATCCAGACGAGGCTCCTCCCTCTCACGGCCGCAACCGCGCGCGGCGAATTGAACTCAGACCGCGTCCTGGACTTGCAGGACATCCTGAGAAGATTCTCCTTCGACAACATTTGCAAATTCTCGTTCGGCCTCGACCCGGGCTGTCTCCTTCCAACGCTCCCGGTCTCCGACCTCTCCGTCGCGTTCGACTTGGCCTCGAAGCTCTCCGCCGAACGCGCCATGACGGCGTCGCCGTTTGTTTGGAAGGTGAAACGACTCCTCGACGTGGGGTCGGAGAAGAAGCTGAGAGAGGCCATCAAGGTCGTAAACGACGTCGCGAAGGAGATGATACGGCAGAGGAGGGAGATAGGGTTCAACACGCGGAACGACCTGCTCTCGCGGTTCATGGGGTCGGTAAACGACGACGTTCACTTGAGGGACATTGTGGTGAGTTTTCTTTTGGCGGGTCGCGACACCGTTGCCGCCGCGTTGACGGGGTTTTTTTCTCTGCTGTCGAAAAGCCCGCAAGCGGAGGCGTTGATCCGGGAGGAGATGGGCCGGGTGGTGGGCCCGGTTCAGGGGCTTGAGTTCCCCACCTTCGAACAGATTCGCGAAATGCATTACCTCAACGCTGCGATTCACGAGAGCATGCGCCTGTTCCCACCGATTCAGTTCGATTCGAAGTACGCCACGGAGGATGACGTGTTGCCAGATGGCACTTTCGTACGGAAGGGGAGCAGGGTGACGTATCACCCTTACGCGATGGGCCGGATGGAGAGCATTTGGGGGCCCGATTGCATGGAGTTCAGGCCCGAAAGGTGGTTGCGCGACGGGGCGTTCGTGCCCGCGTGTCCCTTTAAGTACCCGGTTTTTCAGGCCGggttaagggtgtgtttggggAAGGACTTGGCTCTGATGGAGATGAAAGCCCTTGCGGCTGCGTTGGTTCGGCGGTTCGATATTCGGGTTGTTGAACCGGATCAGGAGCCCCGGTTCGCGCCCGGTCTTACTGCCACTTTGAGAGGCGGGTTGCCGGTTCGGGTTTGTGAGAGGAAATGTTGA 1518 0.5665 MSFEGFLSLQSMSATCGFLFFSFTLLFSFFSFLVFISRMKPWCNCDICKSYLTASWSSKFPNLCDWYTHLLHKSPTGTIRVHVLGNTITSNPDNVEYILKTNFQNYPKGKPFSAILGDLLGRGIFNVDGESWRFQRKMASLELGSVAIRSYAMELVNEEIQTRLLPLTAATARGELNSDRVLDLQDILRRFSFDNICKFSFGLDPGCLLPTLPVSDLSVAFDLASKLSAERAMTASPFVWKVKRLLDVGSEKKLREAIKVVNDVAKEMIRQRREIGFNTRNDLLSRFMGSVNDDVHLRDIVVSFLLAGRDTVAAALTGFFSLLSKSPQAEALIREEMGRVVGPVQGLEFPTFEQIREMHYLNAAIHESMRLFPPIQFDSKYATEDDVLPDGTFVRKGSRVTYHPYAMGRMESIWGPDCMEFRPERWLRDGAFVPACPFKYPVFQAGLRVCLGKDLALMEMKALAAALVRRFDIRVVEPDQEPRFAPGLTATLRGGLPVRVCERKC 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2370 505 PANTHER CYTOCHROME P450 18 502 - -
Ssu3g2370 505 SUPERFAMILY Cytochrome P450 61 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 Gene3D Cytochrome P450 58 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PANTHER CYTOCHROME P450 94C1 18 502 - -
Ssu3g2370 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 Pfam Cytochrome P450 86 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g2370 505 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2370 Ssu-Chr3 74771453 74772970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2370 33 503 Cytochrome P450 AT2G27690 61.345 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2370 K20624 - gmx:100813091 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2370 3 74771453 74772970 Ssu3g2370 3 74771453 74772970 ECH