Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2361 ATGGATCCACCCCAAAGCCTCAGCGAAGCAAAGGCAGCAGCACTTCATCATTACAGTAAAAGCTTCCAAGGCTTCTCGGCCATGATTACACCAGAGCAAGCTAATCAACTTGCGGAATATAAATCAGTAGTGTCCGTTTTTGAGAGCAAAATGAATAAACTCCACACAACACATTCTTGGGATTTTCTTGGATTGGAGACTGTCTACAATAGCAACCATACAGCACTGACCACTGCATCCGATGTCATTGTTGGTGTCATTGACTCTGGAATCTGGCCGGAATCAGAAAGTTTCACTGATTGTGGATTAGGTCCTGTGCCCAAAAAATTCAAGGGAGAGTGTGTTACTGGGGAGAATTTTACACTAGCCAATTGCAACAAGAAAATCATTGGTGCCCGGTTCTACTTAAAAGGGTTTGAAGCGGAGGAAGGTCCTCTAGCAGGCGTTGTCAACAGGACTTTTTTCCGGTCACCTAGAGATAGTGATGGGCATGGAACACACACAGCTTCCACAATAGCAGGGTCCATTGTTGCTAATGCCAGCTTACTTGGCATTGCCAAAGGAACTGCTAGAGGTGGTGCCCCAAGTGCTAGACTTGCCATCTACAAGGCCTGTTGGTTTGGGTTCTGCAGTGATGCTGATGTTCTTTCTGCCATGGATGATGCCATCCATGATGGGGTTGACATACTATCTCTTTCCCTTGGCCCTAGCCCTCCCCAGCCAATTTACTTTGAGAATGCAGTCAGTGTAGGAGCATTCCATGCATTTCAAAACGGTGTTCTTGTTTCTGCCTCAGCTGGAAACTCAGTTTTTCCGCGTACTGCATGCAATGTTGCTCCTTGGATCCTCACTGTAGCTGCTAGCACAATAGACAGGGAATTCAGTTCAAATATCTACCTTGGTAACTCGAAGGTTTTGAAGGGCTCTTCTTTGAATCCAATAAGAATGGAGCACTCGTATGGTTTGATAGATGGAAGTGCCGCTCCAGCCGCTGGAGTTTCAGCAACAAATGCAAGCTTCTGCAAGAACAATACTCTAGATCCTTCCTTAATCAAGGGTAAAATTGTGATCTGTACAATTGAGAAATTCACTGATGACAGAGGAGAGAAGGCCAAAGTAGTAAGGCAAGGTGGGGGTGTTGGAATGGTACTTATTGATCATAATGCCAAAGATATTGGTTTTCAATTTGTCATCCCAAGCACTCTCATTGGTCAGGATGCCGTAGAAGAACTTCAAGCATATATAAAGACAGAGAAGAATCCCATTGCTAGAATCTACCCAACAATAACTGTAGTTGGTACCAAGCCTGCACCAGAAATGGCAGCTTTTTCTTCCATGGGGCCAAATATCATAACACCAGACATTATTAAGGCAAGTTTACTCAGACCTGGAGTGAATATTTTAGCAGCATGGTCTCCAGTGGCAACTGAAGCCACAGTTGAACAACAATCTGTCGACTATAACATCATTTCAGGAACATCAATGTCTTGCCCTCACATAACTGCAGTTGCAGCAATTATAAAGTCTCACCACCCATACTGGGGTCCTGCAGCCATAATGTCTGCAATAATGACAACAGCAACAGTTATGGATAACACACACCACATCATAGAAAGAGAACCAAATGGAACTCAAACCACACCATTTGACTATGGATCTGGACATGTTAACCCAGTTGCATCACTCAATCCTGGATtagtatatgattttaattcccAAGATGTTCTCAATTTTCTGTGCAGCAACGGGGCAAGCCCAGCACAACTTAAGAACCTCACTGGGGGTCTTACTCAATGTCACAAACCTCTTACAGCTTCCTACAACTTCAACTATCCTTCAATTGGTGTGTCCAACTTGAATGGAAGTTTATCAGTTTATCGTACAGTTACTTATCGTGGAGAGGAACCAACAGTATACTATGCAAGTGTTGAAAATCCATCTGGTGTGAATGTTAGAGTTACTCCAGCAGAATTGAAGTTCTGGAAAAGTGGGGAGAAGATAACTTTCAGGATTGATTTCCTCCCTTTCGAGAATAGCAACGGAAACTTTGTGTTTGGTGCCTTGATATGGAACAATGGCATACAAAGGGTTAGGAGTCCTATTGGTCTCAACGTACTATCTACTTAA 2127 0.4321 MDPPQSLSEAKAAALHHYSKSFQGFSAMITPEQANQLAEYKSVVSVFESKMNKLHTTHSWDFLGLETVYNSNHTALTTASDVIVGVIDSGIWPESESFTDCGLGPVPKKFKGECVTGENFTLANCNKKIIGARFYLKGFEAEEGPLAGVVNRTFFRSPRDSDGHGTHTASTIAGSIVANASLLGIAKGTARGGAPSARLAIYKACWFGFCSDADVLSAMDDAIHDGVDILSLSLGPSPPQPIYFENAVSVGAFHAFQNGVLVSASAGNSVFPRTACNVAPWILTVAASTIDREFSSNIYLGNSKVLKGSSLNPIRMEHSYGLIDGSAAPAAGVSATNASFCKNNTLDPSLIKGKIVICTIEKFTDDRGEKAKVVRQGGGVGMVLIDHNAKDIGFQFVIPSTLIGQDAVEELQAYIKTEKNPIARIYPTITVVGTKPAPEMAAFSSMGPNIITPDIIKASLLRPGVNILAAWSPVATEATVEQQSVDYNIISGTSMSCPHITAVAAIIKSHHPYWGPAAIMSAIMTTATVMDNTHHIIEREPNGTQTTPFDYGSGHVNPVASLNPGLVYDFNSQDVLNFLCSNGASPAQLKNLTGGLTQCHKPLTASYNFNYPSIGVSNLNGSLSVYRTVTYRGEEPTVYYASVENPSGVNVRVTPAELKFWKSGEKITFRIDFLPFENSNGNFVFGALIWNNGIQRVRSPIGLNVLST 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2361 708 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 55 IPR037045 -
Ssu3g2361 708 CDD PA_subtilisin_like 297 425 - -
Ssu3g2361 708 Pfam PA domain 338 411 IPR003137 -
Ssu3g2361 708 PRINTS Subtilisin serine protease family (S8) signature 160 173 IPR015500 -
Ssu3g2361 708 PRINTS Subtilisin serine protease family (S8) signature 79 98 IPR015500 -
Ssu3g2361 708 PRINTS Subtilisin serine protease family (S8) signature 491 507 IPR015500 -
Ssu3g2361 708 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 6 703 - -
Ssu3g2361 708 CDD Peptidases_S8_3 53 528 IPR034197 -
Ssu3g2361 708 Gene3D - 291 432 - -
Ssu3g2361 708 Pfam Subtilase family 80 535 IPR000209 GO:0006508|GO:0008236
Ssu3g2361 708 SUPERFAMILY Subtilisin-like 54 566 IPR036852 GO:0004252|GO:0006508
Ssu3g2361 708 ProSitePatterns Serine proteases, subtilase family, serine active site. 492 502 IPR023828 -
Ssu3g2361 708 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 6 703 IPR045051 -
Ssu3g2361 708 Gene3D Peptidase S8/S53 domain 81 574 IPR036852 GO:0004252|GO:0006508
Ssu3g2361 708 Pfam Fibronectin type-III domain 608 701 IPR041469 -
Ssu3g2361 708 Pfam Peptidase inhibitor I9 9 54 IPR010259 -
Ssu3g2361 708 ProSiteProfiles Serine proteases, subtilase domain profile. 59 562 - -
Ssu3g2361 708 Gene3D - 579 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2361 Ssu-Chr3 74567847 74572105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2361 6 701 Subtilisin-like Serine Gene Family AT2G04160 44.583 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2361 - - gmx:100792672 1235.71