Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2299 ATGGCGACGTACTTTCATGGCAGCACTTCAGAAATCCCGTCCTCCGCTGAAGGGCTGCAGACACTTTACCTTATGAACCCAAACTACGTGCCGTACTCTGACGCGGCGCAACACCCAACGCAAAACATGCTCCTCGTCAATCCCAACACTAGTAACACTAGTCCCACTCCCGCCAACGCGCTCAACCTCGCCAACTTCTCCCACGCGCCGCCACCTCCGTCTCCCAACAACCACCGTGAACAACACCTAATTGGGGTTACCATTCCCTCCTCAAACATCCTCGGATCCGCAGCCGACCCCGCCCGACCGTCGTTCCTCGGACAACACGAATTCTCCGGCTTCCATGGCGGTGCTGCCGCCGCCACAACGGCAGTAGCCTCTCGTGCTCACTACAACTTATGGGGTTCTTCCATAATTGATCAACCTGCGTCGGACATCATGGCAGTATCGGTAAACACCCCATCTAGTAGTATAGGGTGTGTTGCCGGTACTGCCTCTGTATCGACGCAGATTGGTTTTCATAGGCCTAATCATTTGTCACTAAGCCTTTCGTCGCAACAAACACCTTATAGGTCGCTCTCCGGGGAGGTTCAGGCGATATCTCCGGCGAGTCGTGGAGGGGAAGATATGCGGGGAGTTTATAGCATGCATAGTGTTGTTGTGGGTTCCAACTATTTGAAAGCCGCGCAGGAGCTTCTTGATGAAGTTGTGAATGTGGGTAAGGGAATCTCCAAGGGGAAGAATCTATGGAGGGGGCTAAGAAAGAGAAGATGA 774 0.5349 MATYFHGSTSEIPSSAEGLQTLYLMNPNYVPYSDAAQHPTQNMLLVNPNTSNTSPTPANALNLANFSHAPPPPSPNNHREQHLIGVTIPSSNILGSAADPARPSFLGQHEFSGFHGGAAAATTAVASRAHYNLWGSSIIDQPASDIMAVSVNTPSSSIGCVAGTASVSTQIGFHRPNHLSLSLSSQQTPYRSLSGEVQAISPASRGGEDMRGVYSMHSVVVGSNYLKAAQELLDEVVNVGKGISKGKNLWRGLRKRR 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2299 257 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 244 - -
Ssu3g2299 257 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2299 Ssu-Chr3 73374805 73375578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2299 1 238 Homeobox Transcription Factor Family AT2G35940 33.202 6.07e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2299 - - gmx:100786883 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2299 3 73374805 73375578 Ssu3g2299 3 73374805 73375578 ECH
Ssu8g0730 8 12025795 12029066 Ssu3g2299 3 73374805 73375578 PCT