Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2282 atGTCTACAACATCGGATTCCAAGGCCACCGTAGTGGACGAGTGTCGTGGCGTTCTTCATGTTTATAGCGATGGTTCCATAGTACGCTCTTCACGCTCCAGCTTCAACGTCCCTGTAAACGACGACGGCACCATTTTGTGGAAAGATGTCGTTTTTGACCCTGCCCATGATCTTCAGCTTCGGCTCTACAAGCCAGCTGACTCAGCCGGCTCCAAACTTCCAGTTTTCTTCTACTTCCACGGCGGTGGCTTTTGCATTGGCTCACGCACTTGGCCTAACtgtcaaaattattgttttcgGCTTGCTTCTCAGCTTCGAGTTGTAGTCATTGCCCCGGATTATCGGCTCGCCCCAGAGAACCGGCTCCCCGTCGCAATTGAAGATGGCTTTGTGGCTGTTAAGTGGCTTCAAACTCAAGCCGTGAGTAATGAGTTGGATCCGTGGTTGAGCCACGTGGCTGATTTTAGCCGAGTGTTCATTTCTGGTGACTCAGCTGGAGGAAACATAGCTCACCATTTGGCGGTTCGGCTTGGGTTTGGGTCGCTCGAGCTAGCACCGGTTTGGGTCAGAGGTTATGTTCTATTGGGCCCTTTCTTTGGTGGAATTATCCGAACCAAGTCAGAAGCTGAAGGACCAAAAGATGCTTTTCTCAATTTAGAACTTATTGATAGGTTTTGGAGGCTTTCTATACCCCTTGGGGAGACTACTGATCACCCTCTTGTGAATCCGTTTGGGCCGAATAGCAAGAGCCTTGAAGGAATTAATCTAGACCCAATTTTAGTGGTGGCTGCAGCAAGTGATTTGCTTAAAGACAGGGCAGAGGATTATGCAAGGAGACTTAAGGAGTGGGGTAAAGATATAGAGTATGTGGAATTTGAAGGACAACAACATGGTTTCTTCACGATTGATCCCAACTCAGAACCATCAAACATGTTGATGCTGATCATCAAACAATTCATAGAGAAGCATTTGGGGAAAGTTTGA 984 0.4695 MSTTSDSKATVVDECRGVLHVYSDGSIVRSSRSSFNVPVNDDGTILWKDVVFDPAHDLQLRLYKPADSAGSKLPVFFYFHGGGFCIGSRTWPNCQNYCFRLASQLRVVVIAPDYRLAPENRLPVAIEDGFVAVKWLQTQAVSNELDPWLSHVADFSRVFISGDSAGGNIAHHLAVRLGFGSLELAPVWVRGYVLLGPFFGGIIRTKSEAEGPKDAFLNLELIDRFWRLSIPLGETTDHPLVNPFGPNSKSLEGINLDPILVVAAASDLLKDRAEDYARRLKEWGKDIEYVEFEGQQHGFFTIDPNSEPSNMLMLIIKQFIEKHLGKV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2282 327 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 158 170 IPR033140 -
Ssu3g2282 327 Gene3D alpha/beta hydrolase 10 322 IPR029058 -
Ssu3g2282 327 PANTHER CARBOXYLESTERASE 15-RELATED 8 321 - -
Ssu3g2282 327 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
Ssu3g2282 327 PANTHER ARYLACETAMIDE DEACETYLASE 8 321 - -
Ssu3g2282 327 SUPERFAMILY alpha/beta-Hydrolases 15 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2282 Ssu-Chr3 73019555 73020748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2282 11 321 Carbohydrate Esterase AT5G16080 35.294 4.73e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2282 - - aprc:113858789 585.874