Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2281 ATGTCTACAACATCAAATTCCAAGGCAACCGTAGTGGACGAGTGTCGTGGCGTGCTTCATGTTTATAGCGACGGCTCCATAGTACGCTCTTCAAGCTCAAGCTTCAACGTCCCCGTCCACGACGACGGCACCGTTTTGTGGAAAGATGTCGTTTTCGACCCAGCCCATGATCTTCTGCTTCGGCTCTGTAAGCCAGCCCACTCAGCCGGCTCCAAGCTTCCCGTTGTCTACTTCTTTCACGGCGGCGGCTTTTGCATTGGCTCGCGCACTTGGCCTAACTGGCAAAACTACTGTTTTCGGCTTAGTTCTCAACTTTGA 318 0.5252 MSTTSNSKATVVDECRGVLHVYSDGSIVRSSSSSFNVPVHDDGTVLWKDVVFDPAHDLLLRLCKPAHSAGSKLPVVYFFHGGGFCIGSRTWPNWQNYCFRLSSQL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2281 105 PANTHER ARYLACETAMIDE DEACETYLASE 8 104 - -
Ssu3g2281 105 Gene3D alpha/beta hydrolase 18 105 IPR029058 -
Ssu3g2281 105 SUPERFAMILY alpha/beta-Hydrolases 14 98 IPR029058 -
Ssu3g2281 105 PANTHER CARBOXYLESTERASE 15-RELATED 8 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2281 Ssu-Chr3 73017896 73018213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2281 5 104 Carbohydrate Esterase AT1G68620 38.462 1.58e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2281 - - aprc:113858789 165.236