Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2280 ATGAGTAATGCGCTGGACCCTAGGTTGAGCCACATGGCTGATTTTAGCCGCGTGTTCATTTCGAGTGATTCGGCTAGTGGGAACATTGCTCATCATTTGACGGCTCAACTTGGGGTTGGGTCACCCAAGTTGACCCCAGTTCAGGTTAGGGGTTATGTTTTATTGGACCTTTTCTTTAGTGGAACTATCCGAACCAAGTCAGAAGCTGAAGGACCAAAAGATGCTTTTCTCAATTTAGAACTTATTGATAGGTATTTGAGGCTTTGTATACCCGTTGGGGACAATATTGATCACCCTCTTGTGAATTTGTTTAGGCCGAATAGCAAGAGCCTTGAAGGAATTAATCTAGACCCAATTTTAGTGGTGGCTACTGGAAGTGATTTGCTTAAAGACAAGACAGAGGATTACGCAAGGAGGCTTAAGGAGCGGGGTAAAGATATAGAGTATGTAGAATTTGAAGGACAACAACATGGGTTCTTCACTGTTGATCCCAACTCAGAACCATCAAACAAGTTGATGTTGATCATCAAACAATTCACAGAGAAGCATTTGGGGAACGTTTGA 564 0.4273 MSNALDPRLSHMADFSRVFISSDSASGNIAHHLTAQLGVGSPKLTPVQVRGYVLLDLFFSGTIRTKSEAEGPKDAFLNLELIDRYLRLCIPVGDNIDHPLVNLFRPNSKSLEGINLDPILVVATGSDLLKDKTEDYARRLKERGKDIEYVEFEGQQHGFFTVDPNSEPSNKLMLIIKQFTEKHLGNV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2280 187 SUPERFAMILY alpha/beta-Hydrolases 14 185 IPR029058 -
Ssu3g2280 187 Pfam alpha/beta hydrolase fold 12 160 IPR013094 GO:0016787
Ssu3g2280 187 PANTHER ARYLACETAMIDE DEACETYLASE 13 181 - -
Ssu3g2280 187 Gene3D alpha/beta hydrolase 4 185 IPR029058 -
Ssu3g2280 187 PANTHER CARBOXYLESTERASE 15-RELATED 13 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2280 Ssu-Chr3 73017051 73017793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2280 18 180 Carbohydrate Esterase AT3G05120 33.129 4.55e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2280 - - gmx:100791656 295.434