Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu3g2279 | ATGGCTGATTTTAGTCGGGTGTTCATTTCGGGTGACTCAACTGGTGGGAACATTGCTCACCATTTGGCGGCTCGGCTTGGGTTTGGGTTGCCCAAGGTggggttggtttgggtcaggGTTGGGGACAATACTGATCACCCTCTTGTGAATCCGTCTGGGCCGAATAGCAAGAGCCTTGAAGGAATTAATCTAGACCCAATTTTAGTGGTGGCTGCAGCAAGTGATTTGCTCAAAGACAGGACAGAGGATTATGCAAGGAGGCTTAAGGAGTTGGGTAAAGATATAGAGTATGTAGAATTTGAAGGACAACAACATACTTTCTTCACTATTGACCCCAACTCAGAAACATCGAATAAGTTGATGCTGATCATCAAACAATTCATCGAGAAGCATTTGGGGAAAGATTGA | 408 | 0.424 | MADFSRVFISGDSTGGNIAHHLAARLGFGLPKVGLVWVRVGDNTDHPLVNPSGPNSKSLEGINLDPILVVAAASDLLKDRTEDYARRLKELGKDIEYVEFEGQQHTFFTIDPNSETSNKLMLIIKQFIEKHLGKD | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu3g2279 | 135 | SUPERFAMILY | alpha/beta-Hydrolases | 3 | 132 | IPR029058 | - | |
| Ssu3g2279 | 135 | Gene3D | alpha/beta hydrolase | 1 | 134 | IPR029058 | - | |
| Ssu3g2279 | 135 | PANTHER | CARBOXYLESTERASE 15-RELATED | 36 | 129 | - | - | |
| Ssu3g2279 | 135 | PANTHER | CARBOXYLESTERASE 15-RELATED | 3 | 39 | - | - | |
| Ssu3g2279 | 135 | PANTHER | ARYLACETAMIDE DEACETYLASE | 36 | 129 | - | - | |
| Ssu3g2279 | 135 | PANTHER | ARYLACETAMIDE DEACETYLASE | 3 | 39 | - | - | |
| Ssu3g2279 | 135 | Pfam | alpha/beta hydrolase fold | 38 | 108 | IPR013094 | GO:0016787 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu3g2279 | Ssu-Chr3 | 72966082 | 72966769 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ssu3g2279 | 7 | 128 | Carbohydrate Esterase | AT3G05120 | 31.013 | 3.38e-14 | 65.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu3g2279 | - | - | gmx:100791656 | 201.06 |