Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2145 ATGCTAGCAGGTCTCAAGTGCACTTTTGACTCACGAATCATGGCGAATGTGGCAATTGTTGAGCTTAATAGAAACAGTGCCAAGACAGTGGAAGAGATAGTGAAATTGGAGAGAAAGATCTTTCCCAAACACGAATCACTAGCTTCATTCTTTCACGATGAACTGAGAAAGAAAAACAGTGGATTGCTTTATCTTCACGTGGATGGCGAACTTGCAGGCTACGTCATGTATTCTTGGCCTTCTTCCTTGTACGCGTCCATCACCAAGCTCGCAGTGAAGGAGCAGTGGAGGAGACAAGGCCACGGAGAGGCTCTGTTGAGAGCGGCAATTCAGAAATGCAGGACAAGGAAAGTGTCGCGCATAATGCTTCATGTGGATCCCTTGAGGACTCCTGCAGTGAATCTTTACAAGAAATATGGTTTCCAAGTTGACACTTTGATTCAAGGGTACTACTCCTCAGATCGAGATGCCTATAGAATGTTCTTGGACTTCGATTCAAGTTGA 504 0.4504 MLAGLKCTFDSRIMANVAIVELNRNSAKTVEEIVKLERKIFPKHESLASFFHDELRKKNSGLLYLHVDGELAGYVMYSWPSSLYASITKLAVKEQWRRQGHGEALLRAAIQKCRTRKVSRIMLHVDPLRTPAVNLYKKYGFQVDTLIQGYYSSDRDAYRMFLDFDSS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2145 167 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 27 164 IPR016181 -
Ssu3g2145 167 Coils Coil 19 39 - -
Ssu3g2145 167 Pfam Acetyltransferase (GNAT) family 33 141 IPR000182 GO:0016407
Ssu3g2145 167 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 14 166 - -
Ssu3g2145 167 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 165 IPR000182 GO:0016407
Ssu3g2145 167 Gene3D - 16 163 - -
Ssu3g2145 167 CDD NAT_SF 68 124 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu3g2145 Acetyltransf_1 4e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2145 - - gmx:100808090 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2145 3 70082567 70083558 Ssu3g2145 3 70082567 70083558 ECH