Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2137 ATGGCGTCTGGGTCCTCGGGTCGCGGCAACTCTGGTTCCAAGGGTTTCGATTTCGGTTCCGATGACATCCTCTGCTCCTACGACGACTACGCTAATCGTGATTCCAGTTCCAACGGCAATCACGCCGATCCGCAGGATTTTCACAAATCAAGGATGGCAAGGACATCAATGTTTCCTACTACTGCCTACAATCCGCCTGAAGATTCTTTAGGTCAAGATGTGATTGTGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTCATGCGGTTTCTCGAGGGACTTAGTTCAAGGCTATCACAGTTGGAATTATACTGCTACAATCTTGACAAATCTATTGGGGAAATGAGATCTGATTTAAATCGTGACCATGTGGAACAAGATTCCAGGCTGAAATCTCTTGAAAAGCACCTTCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAGGAATCATCTTCCTCAAGCCATTCACAGTCCAATGAGGAGAGGTCTTCACCTACCACAGATCCGAAAAAAACTGACAATGCATCTGATTCAAACAACCAGCAGTTGGCTCTTGCCTTGCCACATCAAATTGCCCCTCTGCAGCAGCCTGCGGCACCCCCGGCTCAGGCTCCTGCACCAAATGTGACTCAAGCCCCTCAACAACCTCCTTATTACATGCCATCCGCCCCCCTGCCAAATCCAGCTGTGCCCCAGCTCCCCCAGAATCAGTATTTACCTTCTGATCAACAATATCGAACACCTCAACTTGTGGCTCCACAACCAACCCCATCTCAAGTAGCCCCATCCCCACCTGTGCAACAATTTTCTCACTATCAGCAGCCACAGCCACAGCCACAGCAGCCAccgcagcagcagcagcaacaaTGGTCACAGCAGGTGCAACCTCCACAGCCACCCCCAATGCAATCTCAAATTAGACCCCCCTCTCCAAATGTGTACCCTCCATACCAGCCAAATCAAGCATCAAACCCATCACCCCCAGAAACACTACCAAACAGCATGGCCATGCAAATGCCATATTCAGGAGTTCCACCCCCAGGATCTAGCCGTGGTGACGCCATACCATATGGATATGGAGGAGCTGGCAGAACAGTTCCACAGCAACCTCCACCCCAGCAGATGAAGGGCTCTTTTCCTGCACAAGCAGGTGAAATGTATGGACCGACCGGGACCCTCCCCGCGCTTCCTCCACCTAGTAGTGCATACATGATGTATGATGGTGAGGGAGGGAGAACACATCATCCACCCCAACCTCATTTTGCTCAACCTGGATATCCCCCAGCAAGTGCTTCCCTTCAGAACTCCCCAGGCCATAATCTCATGGTCCGAAATCCAAACCAGTCACAATTTGTCCGCAACCATCCCTACAATGAGTTGATTGAGAAACTAGTGAGCATGGGATTCAGGGGTGACCATGTGGCAAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAACTCAGTACTTGACAGGTTGAATGTGCATAGCTCTGTGGGTCCTCAGAGAGGATGGTCAGGGTGA 1602 0.49 MASGSSGRGNSGSKGFDFGSDDILCSYDDYANRDSSSNGNHADPQDFHKSRMARTSMFPTTAYNPPEDSLGQDVIVTVEKSMKKYADNLMRFLEGLSSRLSQLELYCYNLDKSIGEMRSDLNRDHVEQDSRLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEERSSPTTDPKKTDNASDSNNQQLALALPHQIAPLQQPAAPPAQAPAPNVTQAPQQPPYYMPSAPLPNPAVPQLPQNQYLPSDQQYRTPQLVAPQPTPSQVAPSPPVQQFSHYQQPQPQPQQPPQQQQQQWSQQVQPPQPPPMQSQIRPPSPNVYPPYQPNQASNPSPPETLPNSMAMQMPYSGVPPPGSSRGDAIPYGYGGAGRTVPQQPPPQQMKGSFPAQAGEMYGPTGTLPALPPPSSAYMMYDGEGGRTHHPPQPHFAQPGYPPASASLQNSPGHNLMVRNPNQSQFVRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSVLDRLNVHSSVGPQRGWSG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2137 533 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 531 - -
Ssu3g2137 533 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 531 - -
Ssu3g2137 533 MobiDBLite consensus disorder prediction 217 255 - -
Ssu3g2137 533 MobiDBLite consensus disorder prediction 165 199 - -
Ssu3g2137 533 Coils Coil 132 168 - -
Ssu3g2137 533 MobiDBLite consensus disorder prediction 316 348 - -
Ssu3g2137 533 MobiDBLite consensus disorder prediction 217 258 - -
Ssu3g2137 533 MobiDBLite consensus disorder prediction 270 377 - -
Ssu3g2137 533 Pfam UBA-like domain (DUF1421) 479 523 IPR010820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2137 Ssu-Chr3 69888860 69895869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2137 55 187 Trihelix Transcription Factor Family AT5G14540 33.083 3.33e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2137 - - gmx:100782994 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2137 3 69888860 69895869 Ssu3g2137 3 69888860 69895869 ECH