Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2119 ATGGCAGCAGAGACAGGACAAACACCCCACAGGTTTCTCGGCCTCTTGATTTTGATGATTCCGATGCTGCTTCTTAGCTCCTCACCCTCGTCTCAAGCTGTGGCAAGGGAATTTGATGTTGGTGACAAAGATGGGTGGGTGGTGAAACCCGCCGAAGACTACGATCACTGGGCTCAGAGAAACAGATTTCAAGTCAATGACACTCTCCATTTCAAGTACAAGAAAGGGAGTGATTCGGTTGTGGTGGTGAGGAAGGAGGACTTCGATTCATGCAACGCCAACAACCCCATACAAAGATGGACGACGGTGATTCAACGTTCCTACTTTCCAACCCGGGTCTCTTTTTCTTCATAA 354 0.4859 MAAETGQTPHRFLGLLILMIPMLLLSSSPSSQAVAREFDVGDKDGWVVKPAEDYDHWAQRNRFQVNDTLHFKYKKGSDSVVVVRKEDFDSCNANNPIQRWTTVIQRSYFPTRVSFSS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2119 117 PANTHER BLUE COPPER PROTEIN 23 101 IPR039391 GO:0009055
Ssu3g2119 117 PANTHER EARLY NODULIN-LIKE PROTEIN 2 23 101 - -
Ssu3g2119 117 Gene3D - 34 114 IPR008972 -
Ssu3g2119 117 SUPERFAMILY Cupredoxins 35 102 IPR008972 -
Ssu3g2119 117 Pfam Plastocyanin-like domain 46 103 IPR003245 GO:0009055
Ssu3g2119 117 ProSiteProfiles Phytocyanin domain profile. 36 117 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2119 Ssu-Chr3 69523871 69525128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2119 37 97 Phytocyanin Superfamily AT4G28365 60.656 4.07e-26 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2119 - - gmx:100778867 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2119 3 69523871 69525128 Ssu3g2119 3 69523871 69525128 ECH