Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2114 ATGGCTGATGGACCGCAGCATCCATCAGTTGTTCAGAAGCTAGCTGGACAGTCTTACCTGGTGTCCAGGCTTAGCCCCAACTTTCACTCCAGGAATTATTCTGCAACTGGCTCTTTCTTCAATGGAGGAGTGCACTCTTCTGGGTTGGCTGTTGTGTCACCTGTATCTCCAATTACTGTGCATGCTCCAGCAGAGAAAGGAGCTGGTGCTTTTCTGGTGGATTTTCTGATGGGTGGAGTGTCTGCTGCTGTGTCAAAGACAGCTGCTGCTCCAATTGAACGAGTCAAATTGCTTATCCAAAATCAGGATGAAATGATCAAAAGTGGTCGGTTATCTGAGCCATACAAGGGAATTACTGATTGTTTTGCTCGAACCATGAAGGATGAGGGTGTAATTGCTCTTTGGAGAGGCAATACTGCTAATGTTATTAGATACTTCCCTACTCAGGCTCTGAACTTTGCTTTTAAGGATTACTTCAAGAGGCTTTTCAACTTTAAAAAGGACAGAGATGGCTACTGGAAGTGGTTTGCTGGGAATTTGGCATCTGGTGGGGCTGCTGGGGCTTCTTCCCTCCTATTTGTCTATTCTTTGGACTATGCCCGTACTCGTTTAGCAAATGATTCTAAGGCTGCAAAGAAGGGTGGTGAGAGGCAGTTTAATGGCTTGATTGATGTTTACAAGAAAACCATTAAGTCTGATGGCGTTGCTGGCCTTTATCGTGGATTCAACATCTCATGTGTTGGAATTATAGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCTCTGAAACCAGTTGTTTTGGTTGGTGGGTTGCAGGATAGTTTCTTTGCTAGTTTCTTTTTGGGATGGGGAATCACAATTGGTGCTGGATTGGCTTCTTATCCCATTGACACTGTACGTAGAAGGATGATGATGACTTCTGGAGAAGCTGTGAAGTACAAGAGCTCTTTGCATGCATTCCAAACTATTGTTGCAAATGAGGGTACCAAGTCACTCTTCAAAGGTGCTGGTGCAAACATACTACGTGCTGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGCTGCAGCTTATTTTGTTTGGAAAGAAATACGGATCTGGCGGCGGCTAA 1116 0.4453 MADGPQHPSVVQKLAGQSYLVSRLSPNFHSRNYSATGSFFNGGVHSSGLAVVSPVSPITVHAPAEKGAGAFLVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGITDCFARTMKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKAAKKGGERQFNGLIDVYKKTIKSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLVGGLQDSFFASFFLGWGITIGAGLASYPIDTVRRRMMMTSGEAVKYKSSLHAFQTIVANEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLILFGKKYGSGGG 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2114 371 Pfam Mitochondrial carrier protein 173 266 IPR018108 -
Ssu3g2114 371 Pfam Mitochondrial carrier protein 275 362 IPR018108 -
Ssu3g2114 371 Pfam Mitochondrial carrier protein 71 166 IPR018108 -
Ssu3g2114 371 Gene3D Mitochondrial carrier domain 72 367 IPR023395 -
Ssu3g2114 371 PRINTS Adenine nucleotide translocator signature 71 83 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu3g2114 371 PRINTS Adenine nucleotide translocator signature 148 160 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu3g2114 371 PRINTS Adenine nucleotide translocator signature 115 136 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu3g2114 371 PRINTS Adenine nucleotide translocator signature 279 295 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu3g2114 371 PRINTS Adenine nucleotide translocator signature 174 187 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu3g2114 371 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 371 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Ssu3g2114 371 PRINTS Mitochondrial carrier protein signature 189 207 IPR002067 GO:0055085
Ssu3g2114 371 PRINTS Mitochondrial carrier protein signature 137 157 IPR002067 GO:0055085
Ssu3g2114 371 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085
Ssu3g2114 371 PRINTS Mitochondrial carrier protein signature 74 87 IPR002067 GO:0055085
Ssu3g2114 371 PRINTS Mitochondrial carrier protein signature 283 305 IPR002067 GO:0055085
Ssu3g2114 371 PRINTS Mitochondrial carrier protein signature 87 101 IPR002067 GO:0055085
Ssu3g2114 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 266 IPR018108 -
Ssu3g2114 371 SUPERFAMILY Mitochondrial carrier 71 356 IPR023395 -
Ssu3g2114 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 274 360 IPR018108 -
Ssu3g2114 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 162 IPR018108 -
Ssu3g2114 371 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2114 Ssu-Chr3 69402074 69404249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2114 3 362 Antiporters AT4G28390 79.893 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2114 K05863 - gmx:100818408 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2114 3 69402074 69404249 Ssu3g2114 3 69402074 69404249 ECH