Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2087 ATGATGAAATTCGGTTTCATGTCCTTACTTCTCACAATATCGGGAGTGCCCATGTCCAAAATCTGCATCAGCAAGGATGTAGCGAATTCTTTTCTCCCGTGTAAAGATGCTCTGAACTTAACTGGATTAACTTCAGCGTCAGCTACTCGTACTTCAACCTCTGAATTGGACATAGCACCAGCTGCTACCAACGAATCCGCAAATGAGGTCAACTATTGTGAAGCAAAGGGCATGGTTAGTTTAATTTCAAGTGATGGAATCCTGCAGCTAAATATATTCATCTCCTTTTTGGCCGTGTTTCACATCTTGTTCTGTACATTGACAATGTGCCTGGGCAAGGCAAAGATGAGAAGATGGAAAAGATGGGAAGACGAGACTCAGACACTTGAATATCAGATAGCTAATGATCCAAGAAGGTTCCAGTATACAGGTCAAACATTGATTTGCAAGCGTCATTTGAAATTCTGGAGCAATCATTCTCCCTTGCTTTGGATGGTTTGCTTTATCCGGCAGTTCTATGCCTCAGTCTCAAAAGATGATTACTTTACTCTACGAAATGGGTTCATTGCAGCTAATATTTCTGTAGGCAGCAATTTCAACTTCAAGAAATTTCTTTCCCGCACTTATGATGAAGATTTTGAGAAGGTTATGGGAATCAGGATTTGGATCTGGATTTTCTCCatacttttcatatttttcagcGCTCATGAGTTCTATAATTACTACTGGCTTCCATTTATTCCACTTGTGGTTGCTTTACTTGCTGGGACAAAACTGCAAGTGGTAATAACAAAGATGTGTGTAGATAGTTGCAAGGAAAACCCAGTTATCAGAGGAAGTCTACTTGTAACACCTAGTGATGCCCATTTCTGGTTTCATCGACCTGAATGGCTTCTCCATTTACTCAAGTTCATCCCTATCCAGAACTCCTTTCAACTTGCATTCTTCACCTGGACTTGGTATGAATTTGGTCCAAGGTCTTGCTTCAATCGAGAAAAAGAGGACATTGCCATAAGGATTGCCATGGGTGTAGCTGTGCAGCTCCTTTGTGGTTATGTGACACTGCCCCTTTATGCACTTGTTACTCGGATGGGTTCTAGCATGAGGAGAGAAATTTTCACTGAGAGTGTTTCTAAGGGTCTCAAAAATTGGCGCAAAAAGGCTAAACAATCTCTGTCCAAAAACAACTCAACTTTAAGCAGACACTCAGAGTCTTTGCGTTCCAAAGTAGGTGACAATTCAGTAAGAGCATCAGTGGATAGTGTGCACACCCCAGGCAATGTTGTGGTCACAAGCCATCCTTCTGTCCCCACCTCTGAAAGAATTGAGGAGGAAAAGAGAATTGCACTTCCCCATAAGCAAGAGATATCAAGTCATTCCACTTCAGAAATCACAGCTATTGAGGAAGAGAACCCCAAGATCATCACCAGAGGAACCTATGACGGTGAGATCTCATTTGGGAGTAGCTGGAAGAATGTGGGCAGTAGCAGGGGCATTGGAGAAATTGGTTCAATAACTGAAGAAGATGATGCTGAAAAATTGCCTGAGTTGATTCCATAG 1560 0.416 MMKFGFMSLLLTISGVPMSKICISKDVANSFLPCKDALNLTGLTSASATRTSTSELDIAPAATNESANEVNYCEAKGMVSLISSDGILQLNIFISFLAVFHILFCTLTMCLGKAKMRRWKRWEDETQTLEYQIANDPRRFQYTGQTLICKRHLKFWSNHSPLLWMVCFIRQFYASVSKDDYFTLRNGFIAANISVGSNFNFKKFLSRTYDEDFEKVMGIRIWIWIFSILFIFFSAHEFYNYYWLPFIPLVVALLAGTKLQVVITKMCVDSCKENPVIRGSLLVTPSDAHFWFHRPEWLLHLLKFIPIQNSFQLAFFTWTWYEFGPRSCFNREKEDIAIRIAMGVAVQLLCGYVTLPLYALVTRMGSSMRREIFTESVSKGLKNWRKKAKQSLSKNNSTLSRHSESLRSKVGDNSVRASVDSVHTPGNVVVTSHPSVPTSERIEEEKRIALPHKQEISSHSTSEITAIEEENPKIITRGTYDGEISFGSSWKNVGSSRGIGEIGSITEEDDAEKLPELIP 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2087 519 MobiDBLite consensus disorder prediction 497 519 - -
Ssu3g2087 519 PANTHER MLO-LIKE PROTEIN 1 506 - -
Ssu3g2087 519 Pfam Mlo family 1 410 IPR004326 GO:0006952|GO:0016021
Ssu3g2087 519 MobiDBLite consensus disorder prediction 390 414 - -
Ssu3g2087 519 PANTHER MLO-LIKE PROTEIN 1 1 506 IPR004326 GO:0006952|GO:0016021
Ssu3g2087 519 MobiDBLite consensus disorder prediction 503 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2087 Ssu-Chr3 68798583 68804574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2087 1 397 MLO family AT2G39200 44.554 1.14e-125 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2087 K08472 - gmx:100789563 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2087 3 68798583 68804574 Ssu3g2087 3 68798583 68804574 ECH