Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2084 ATGACATTTTGGGATTATGCTAGCCGTGAGCCCAAACTCAATCACCTTTTTAATGATGCCATGACTAATGACACTCGATTGATTTCAAGTGTGGTGATTGAGAAGTGCAAGGGAGTGTTCAAAGGACTAGAGTCTTTGGTTGATGTTGGGGGAGGAACAGGGACTATGGCTAAGGCTATTGTCAAGTCATTTCCACAATTGAAGTGTATTGTATTTGATCTCCCACATGTTGTTGATGGCTTGCACGGAACGGAGAACATAAAATATGTTGAAGGGGACATGTTTGAAGCAATTCCTTCTGCTGATTCCATTATGTTGAAGTGTATATTGCATAACTGGAACGATGAGGAATGCTTGAAAATACTGAAGAGATGTAAAGAGGCATTCGCAAGCAAAGATAAAGGAAAGGTGATTATCATAGACGTGGTGATAGAAAACGAGAAGGGAGATGAGTTAGGTCAAACGAAGCTCTTCTATGATGTGGAGATGATGGTGTTAGTTacaggaagagagagaaatgagaaagactGGGCTAAGTTGATTTTCTCTGCAGGTTTCTGTAACTACAAGATAACTCCTGTGTTGGGTTTAAGGTCTCTCATTGAGGTTTATCCGTAG 618 0.3883 MTFWDYASREPKLNHLFNDAMTNDTRLISSVVIEKCKGVFKGLESLVDVGGGTGTMAKAIVKSFPQLKCIVFDLPHVVDGLHGTENIKYVEGDMFEAIPSADSIMLKCILHNWNDEECLKILKRCKEAFASKDKGKVIIIDVVIENEKGDELGQTKLFYDVEMMVLVTGRERNEKDWAKLIFSAGFCNYKITPVLGLRSLIEVYP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2084 205 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 205 IPR016461 GO:0008168
Ssu3g2084 205 Pfam O-methyltransferase domain 1 186 IPR001077 GO:0008171
Ssu3g2084 205 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 204 IPR029063 -
Ssu3g2084 205 PANTHER ORCINOL O-METHYLTRANSFERASE 1 205 - -
Ssu3g2084 205 Gene3D Vaccinia Virus protein VP39 1 205 IPR029063 -
Ssu3g2084 205 PANTHER O-METHYLTRANSFERASE 1 205 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2084 Ssu-Chr3 68541650 68543350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2084 1 191 Monolignol Biosynthesis Gene Families AT5G54160 39.175 2.45e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2084 - K16040 gmx:100793263 361.688