Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2074 ATGGACTCGCATTGCTTCTTACGTTTCCACTTCCCATGTTTTCTTCTCTTCGCTTCCGCCGCATGTTGTATGTCACACCTTTCTCTCCTCGGCATACACCCTCTAGATGAGAAATATTACAGCTCTGAGGTGATCAAGTGCAAGGATGGATCAAAATCCTTCTCCAGAGACCGTCTCAATGACAATTTCTGTGACTGTCCTGATGGTACTGATGAGCCTGGGACTTCAGCTTGCCCTGCCGGAAAGTTTTATTGTAGAAACCTAGGTAGCAAGCCACAGTTTATAGTTTCTTCTCATGTTAATGATCATTTTTGTGATTGTTGTGATGGGAGTGATGAATATGATGGAATCATTTGTTGCCCCAGCAATTGTGTCATGGGTGGGAATGCTGAGTACATGATTAACAATTGCAAGTCAAAAGCAAGCCAAGATGGAGTGAAGTCAGAGGAATCAGTTCATAACCTTACTGGTTTGAAGTTGGCAATTATTCTGCAAGTGGTTCTGGTCATTTTCCTGGTATTTCTCTGGAGTTTTCGTCGCCGCACCAGATCTAGAAGGAGGCATTACCATTGA 573 0.4346 MDSHCFLRFHFPCFLLFASAACCMSHLSLLGIHPLDEKYYSSEVIKCKDGSKSFSRDRLNDNFCDCPDGTDEPGTSACPAGKFYCRNLGSKPQFIVSSHVNDHFCDCCDGSDEYDGIICCPSNCVMGGNAEYMINNCKSKASQDGVKSEESVHNLTGLKLAIILQVVLVIFLVFLWSFRRRTRSRRRHYH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2074 190 Pfam Glucosidase II beta subunit-like 25 151 IPR028146 -
Ssu3g2074 190 PANTHER EXPRESSED PROTEIN 16 189 - -
Ssu3g2074 190 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 16 189 IPR039794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2074 Ssu-Chr3 68361535 68363444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2074 29 130 Calmodulin-binding Proteins AT5G56360 66.990 2.60e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2074 - - gmx:100783506 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2074 3 68361535 68363444 Ssu3g2074 3 68361535 68363444 ECH