Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2045 atggAAGAGACACGAGAAGATGCAGGGCCAGCTGAGCGAAGGCTATCCAACATGTCATGGTGGCCTTCAGATTTTGTCGAAAAATTTGAATCTGTTGCTTTGAGCTCTCAAGATGAGaccttaaataataaagaatcaCCTAGACATTCTAACCAAGATGTCATGTCACCTCAGAATGCGTCACAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCGGTCATTCCGGAGAAAAGACTCAAGAAACTTTTTGATAGTATTCCCACTTTGGACAAGCTTCAAGCTTTGGGTGGAGAGGGTTTTAGGGCTGATGTCATTGTTGTGGATGCAGAGAAAGATAGAAGGTTATCTATGTTGAAGCAACTAATTGTGGCATTGGTTAGAGGCTTGAATTCAAATCCACCAGCGATGATTAAGAAGATAGCTGGATTAGTTTCTGACTTTTATAAACGACCAAATGTAGAAAGTCCAGCAAAAGCTGCACTTGAGGAATCCTCCCACTTGTTTGAGAATCGTGGTGTCCAGATGCTGGGGCAAATAAGGCATGGTTCATGTCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGATACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAATGTGTAGACTCTTACAAGCATATGTCAGTGATAGTTGTGTTAAATTCTGTGGAACTGCTGGTTGATCTTATGCGGTTTCCTGGCCAACTATTACCACGATCAACCAAGTCAATTCTTATGACACACATTTCTGCGGCAGGAGAGAGTGATTCTGCAGAAAATGATTCCTGTGATTCACCATTAGAACCAAATAGTCCTTTATATGGGGTTTCAGAGAGTATTGAAAAGGAGGAAAACCTCCAATTCCATAGAAGATTTGAAGTGTCCTCAAATGTATCAGGCCTTCCCCTGCGAAATATGATGGTACGATCAAATACGAGTGTGGACAGGAATTTGAGTTTTTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTGCGAGCTCATGGACGGTCCAAGCTTAGTGGTGACAGGACTGCTTTTAGAGATTTTGCTGATGACCAGTCTACATTAAGatcCAGCTATAAGTCAGATGGTGCTTCCTCATCCGAGGCTCGTAGGATACGAAGAAGAAGTATCAGCATTACACCAGAGATTGGTGATGATATTGCAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAAAATCGTCTTCCGAGAGAGCAAGGGGGTGATAGTTCATTGTCCCTTTCTCCAAATGATAGAACTAGCAGTGCAGATCTTCAGAAAAATGTGTCAAATTTCCATCTTGGTCATCATGAGCGGTCCCCCTTATATTCGCTACACCGTGACCCTGTAGCGTCTCAAAAGGCAATGTCATTGCCCTCTTCTCCACATGATTATAGAGGACAAGCTTCTGAGAGGAGCGGGGCGCCAGAATATGCAATGAATGATGAACTGGAGTCTACTTGGAATAAAGTCCTTGAATCACCAATGTTCAGTAATAGACCTCTGTTACCATATGAAGAATGGAATATCGATTTCTCAGAATTGACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTTTTCCGTGGCGTATGGAATGGCACAGTTGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGGCTCCGACATCCTAATGTTATCTTATTTCTTGGTGCATGCACAAAGCCCCCACGCTTGTCAATGGTGACTGAATACATGGAGATGGGTTCTTTGTTTTACTTGATTCATGTGAGCGGTCAAAAGAAGAAGCTTAGCTGGCGGAGAAGACTAAGGATGTTGCGTGACATATGCCGGGGCCTAATGCACATACATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCGAATTGTCTTGTGCACAAGCATTGGACAGTgaaaatatgtgattttggaCTTTCAAGAATAATAACGGATTCCCCCATGAGAGATTCTTCATCTGCTGGAACCCCAGAATGGATGGCTCCTGAACTTATTCGAAGTGAACCGTTCACTGAAAAATGTGATATCTTTAGCCTGGGGGTGATAATGTGGGAGCTTTGCACCTTGAATAGGCCATGGGAAGGCGTACCTCCGGAGAGGGTGGTTTATGCCGTTGCTAATGAGGGTTCCCGATTGGATATTCCTGAAGGCCCACTAGGCAGGCTGATTTCAGAGTGTTGGGCGGAACCACATGAACGGCCAAGTTGTGAGGAGATCCTCTCTCGCTTGGTGGACATCGAGTACTCAATGTGTTGA 2445 0.4311 MEETREDAGPAERRLSNMSWWPSDFVEKFESVALSSQDETLNNKESPRHSNQDVMSPQNASQILWRTGMLSEPIPNGFYSVIPEKRLKKLFDSIPTLDKLQALGGEGFRADVIVVDAEKDRRLSMLKQLIVALVRGLNSNPPAMIKKIAGLVSDFYKRPNVESPAKAALEESSHLFENRGVQMLGQIRHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSTKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESIEKEENLQFHRRFEVSSNVSGLPLRNMMVRSNTSVDRNLSFSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSLRAHGRSKLSGDRTAFRDFADDQSTLRSSYKSDGASSSEARRIRRRSISITPEIGDDIARAVRAMNETLKQNRLPREQGGDSSLSLSPNDRTSSADLQKNVSNFHLGHHERSPLYSLHRDPVASQKAMSLPSSPHDYRGQASERSGAPEYAMNDELESTWNKVLESPMFSNRPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGVWNGTVVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLRMLRDICRGLMHIHRMKIIHRDVKSANCLVHKHWTVKICDFGLSRIITDSPMRDSSSAGTPEWMAPELIRSEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVANEGSRLDIPEGPLGRLISECWAEPHERPSCEEILSRLVDIEYSMC 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2045 814 Gene3D Phosphorylase Kinase; domain 1 551 636 - -
Ssu3g2045 814 MobiDBLite consensus disorder prediction 36 57 - -
Ssu3g2045 814 MobiDBLite consensus disorder prediction 442 466 - -
Ssu3g2045 814 SUPERFAMILY Protein kinase-like (PK-like) 533 806 IPR011009 -
Ssu3g2045 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Ssu3g2045 814 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Ssu3g2045 814 Gene3D Transferase(Phosphotransferase) domain 1 637 813 - -
Ssu3g2045 814 MobiDBLite consensus disorder prediction 439 466 - -
Ssu3g2045 814 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 812 - -
Ssu3g2045 814 MobiDBLite consensus disorder prediction 372 391 - -
Ssu3g2045 814 SMART serkin_6 558 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2045 814 MobiDBLite consensus disorder prediction 350 415 - -
Ssu3g2045 814 ProSitePatterns Protein kinases ATP-binding region signature. 564 585 IPR017441 GO:0005524
Ssu3g2045 814 Pfam Protein tyrosine and serine/threonine kinase 559 806 IPR001245 GO:0004672|GO:0006468
Ssu3g2045 814 MobiDBLite consensus disorder prediction 392 407 - -
Ssu3g2045 814 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 812 - -
Ssu3g2045 814 ProSiteProfiles Protein kinase domain profile. 558 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g2045 814 MobiDBLite consensus disorder prediction 493 519 - -
Ssu3g2045 814 CDD STKc_MAP3K-like 564 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2045 Ssu-Chr3 67533623 67544926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2045 1 814 MAP Kinase Kinase Kinase AT3G58640 69.915 0.0 1176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Ssu3g2045 PK_Tyr_Ser-Thr 1.2e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2045 - - gmx:100807193 1531.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2045 3 67533623 67544926 Ssu3g2045 3 67533623 67544926 ECH