Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1995 ATGGCCACTTTCATCTTAAGGTCTAACAAAGCGGTTCATGCCTTTGGCTGGCTCTGTCTCCTGCTGATGGTGCACAAGGGTGCTTCCTATGATTTCATAGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAAATGATCCCAGTTTCAATCCTTTCAATCAATGGGCAGAAAAGAGCCGTTTTAAAATTGGAGACTCCCTTGTGTTCAACTACCAATCTGGCCAAGACTCAGTGCTCAGTGTAAAGAGTGAAGACTATGGCAGTTGCAACATTGATTCACCCTATGCAAAATACTCTGATGGCCACACAGTCTTCAAACTAAACAAATCAGGGTCTTACTTCTTCATAAGTGGAAACAAAGATAAATGTCTCAAAAATGAGAAGTTAACAGTGATTGTGCTAGCTGACAGGAGCAAAaactccaaccaaacaaccacAGCTTCTCCACCCTCACCACAATCACCATCTCCTTCACCAGCACCTACTGGCCAAGAGGGTCAATCTCCAACTCCAGAAACAAACCAAGCACCAAGTCCTGTCAGTGAACCTCCCCCTCCCAATGCTGCTGCTTCAGCCTTTGTCTCCTTTGCTGGCTCTGTTGGAGCATTCATGGCTTCAGTGCTAGTTTTATCTCTCTAA 636 0.4387 MATFILRSNKAVHAFGWLCLLLMVHKGASYDFIVGGQKGWSVPNDPSFNPFNQWAEKSRFKIGDSLVFNYQSGQDSVLSVKSEDYGSCNIDSPYAKYSDGHTVFKLNKSGSYFFISGNKDKCLKNEKLTVIVLADRSKNSNQTTTASPPSPQSPSPSPAPTGQEGQSPTPETNQAPSPVSEPPPPNAAASAFVSFAGSVGAFMASVLVLSL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1995 211 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 211 - -
Ssu3g1995 211 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Ssu3g1995 211 MobiDBLite consensus disorder prediction 149 163 - -
Ssu3g1995 211 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Ssu3g1995 211 CDD OsENODL1_like 30 133 IPR041846 -
Ssu3g1995 211 MobiDBLite consensus disorder prediction 139 189 - -
Ssu3g1995 211 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Ssu3g1995 211 Gene3D - 30 146 IPR008972 -
Ssu3g1995 211 PANTHER BLUE COPPER PROTEIN 5 211 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1995 Ssu-Chr3 65290931 65292066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1995 14 192 Phytocyanin Superfamily AT3G20570 50.000 2.65e-53 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1995 - - gmx:100781182 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1995 3 65290931 65292066 Ssu3g1995 3 65290931 65292066 ECH