Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1865 atgcgaTTGTATATTCAGATGAGTTTGAGTATGAGCTTGTGTGGTAGTTATAGTCTTCAGCTTCCATATCGCAGAGTTGCAAGCTGCAGTCTTCACCGGGATGaCAGGCATGTTGTTCCCATCAATACGCACCAAAAACCTTCTGAACCTGAAAATTGTCTTCAGTCAAAATGGAAGATTAATGGCAATAACATGAGGACATGCATTGGAGTCATGACAGTGGCACACTTGGTCGCTCCAGTTGCTGCAAAAGCTGAAGTGGCTGCTTCTGTTTATGCTTTGGCTGATGGAAGCCTCAGTGACTGGTTTGGAGGCTTTCTATTTTCAGCTGGACAACAGGCCAATGAAGCTGTTCAGGGCCAACTATCCTCTCTTAGTTTCACTAGTTTGGCTGTAATTTATGGGGCAGGGCTTGTAACCAGCCTTTCTCCCTGTACACTTAGTGTCTTACCACTGACCCTTGGTTACATTGGGGCATTTGGCTCTGGCAAAAGCAGAGCAGAGGTTATTGGAGATTCCATTGCATTCTCCTTAGGTCTTGCTACCACATTAGCACTGTTGGGTGTAGGAGCTTCATTTGCAGGAAAGGCTTATGGACAGATTGGCCAAGGATTACCTTTGGCTGCTTCTGGTTTGGCTATAATTATGGGTCTGAACCTTCTTGAGATCATTGAATTACGGCTCCCCTCATTCTTTGACAGTTTTGATCCACGTGCAGCAGCTGCCAATTTCCCATCCAGTGTGCAAGCATACCTGGCTGGGCTTACATTTGCATTAGCTGCCTCACCTTGTAGTACACCTGTTCTTGCAACCCTTCTGGGATATGTTGCTGCATCCAAGGATCCTCTGATTGGAGGCAGCTTACTTTTGACATACACAACTGGCTATGTTTCTCCCTTGCTCTTGGCTGCTTCTTTCGCTGGAGCATTACAGAGCTTGCTTTCATTTCGCAAGTTCTCAGCATGGATCAATCCTATAAGCGGAGCAATGCTGTTAGGTGGTGGCGTATATACTTTCTTAGATAGGCTGTTCCCGGCCACAATGGTGATGTAG 1053 0.4587 MRLYIQMSLSMSLCGSYSLQLPYRRVASCSLHRDDRHVVPINTHQKPSEPENCLQSKWKINGNNMRTCIGVMTVAHLVAPVAAKAEVAASVYALADGSLSDWFGGFLFSAGQQANEAVQGQLSSLSFTSLAVIYGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGDSIAFSLGLATTLALLGVGASFAGKAYGQIGQGLPLAASGLAIIMGLNLLEIIELRLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPLIGGSLLLTYTTGYVSPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1865 350 Pfam Cytochrome C biogenesis protein transmembrane region 134 340 IPR003834 GO:0016020|GO:0017004
Ssu3g1865 350 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 66 350 - -
Ssu3g1865 350 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 66 350 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1865 27 350 Chloroplast and Mitochondria Gene Families AT5G54290 71.681 5.86e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1865 - - gmx:100807029 617.076