LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ssu3g1859	ATGATCAAAGGTTTCAAGAGAGGCGTGGACTGTATTGAGGTTGTTTGTGGCACTACGAACAAAGCATATGGAGATTATGTTGCGAAGCTGAAAATTAACAACAAAGGTGAATATTTCGTCACTTGTCAGTGCAGCCCCAGGTGTCCCTTAGATAGTGTGACTCTAGAGGAATTTGAGAAGCATGCTTTCAAAGAAGGGAGTGGAAGATGGAAAAGCAACATCTGGGTTCATTACGAAAACGAAGACAGGGTTCCACTCTGGAAGACACCTCTGCTGAAATACTACACACACCAGGCAAATGTGGCTAACTGGAAAGACGCAGCACTGAGGAAAAGGAACTTCCACAGGGACGAGTTCGTGCGCTGCTCAAGGTGCAAGAAGGAGCGCAGGTTCCGTCTGAGGAGCAGGCCAGAGATCAAGGAGTACCATGATGCTCTGCACAACAAATCGTGGACTTGTTCTCTTTGGCCTTATCAAAAAATAACCTGCAATGATGAAGAAGAGAGACCAAGTCTGAGAGCAAGCAGGGGCTGTCCTCGTGCTTCAACTTGCCGAGGCTGCTTATCTTGTTATTGCAAAGGGTGCATCAAGTGCCGCTTTGAGGACTGCAATTGCCAAGAATGCAGAGACTTCATGCTATATGCTGAACCTTAG	654	0.4679	MIKGFKRGVDCIEVVCGTTNKAYGDYVAKLKINNKGEYFVTCQCSPRCPLDSVTLEEFEKHAFKEGSGRWKSNIWVHYENEDRVPLWKTPLLKYYTHQANVANWKDAALRKRNFHRDEFVRCSRCKKERRFRLRSRPEIKEYHDALHNKSWTCSLWPYQKITCNDEEERPSLRASRGCPRASTCRGCLSCYCKGCIKCRFEDCNCQECRDFMLYAEP	217

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ssu3g1859	217	PANTHER	PROTEIN ULTRAPETALA 1	1	217	IPR020533	-
	Ssu3g1859	217	PANTHER	PROTEIN ULTRAPETALA 2-LIKE	1	217	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ssu3g1859	Ssu-Chr3	58093156	58096160	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	ULT	Ssu3g1859		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ssu3g1859	-		-	gmx:100817196	403.29