Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1776 ATGGAGCAATTATTTTCTTCCCCAGCAGCAATATGGGTGGTGTCGGTGATCGTAGCTGTGATTCACTTATGGGCACTGCACATGCTGAACTCGCTGTGGCTTAGGCCAAAGAGGTTTGAAAGGCTTCTCAGAGCGCAAGGTCTTCAGGGTGATCCATACTCGCTTTCATGTCGCAACTCCAACCATACCCATATGCAACAACACGAGCCCAAATCTCAACCTTTTGCTCTCTCCAATGATGTTGCGCCTCGTGTATTCACGTCGCTTTATCATACTATCGCCAAATATGGCAAGAATTCCTTTTTTTGGGAAGGTACAACACCAAAGGTGATCATTACGGACCCACAACAAATCAAAGAAGTCTTTAACAACATTCATGATTTCCAGAAACCAAAGTTAAGTGGCAATGCCAAGTTCTTGATCGATGGTCTGATAAATTACGAGGGTGAGAAGTGGGCTAAACATCGAAGGATTATAAACCCAGCATTCCACTTAGAAAAGTTGAAAAATATGCTACCAGCATTTTCTCAAAGCTGCCATGATATGATTAGCACGTTGGAGGGAATGTTGTCATTAGATGGAAAATGTGAGATTGACGTTTGGCCTTTCCTTCAGAATTTGACTCGTGAAGTAATTTCTAGGACAGCATTTGGAAGCAGCTATGCAGAAGGAGAAAAGATATTTGAACTTCTGAAAATGCAGGGGTATCTTTGGATGACTGCGCAGTACAAGAACACACCAATATTGCGGCATCTATCAACAAGTACCAACAAGAGGATGAGAGCAATTCAAAGGGATATGCATGATTCAATTGATGTTATCATCAAAAAACGAGGGAAAGCCATGAAGGATGGTGAAACCTGCAATAAAGATCTATTAAGCATACTTTTGGAATCAAATCAGATGGAAATCCAGGGACATGGAAACAGTAGGACTGTTGGAATGACCAACCAAGAAGTAATTGAGGAATGCAAGCTATTCTACTTGGCAGGGCAAGAGACCACTTCATCTCTGCTGGTTTGGACAATGATCTTATTGGGTAGGTATCCTGAATGGCAAACACGAGCAAGGCAGGAAGTTCTTCAAGTTTTTGGAAACCAAAATCCAAACTTCGATGGGTTAAGTCAGCTTAAAATTGTAACCATGATTTTATACGAGGTTCTCAGGTTATACCCCCCAGCAGTTTTCTTTAGTCGTGCACTTCAAAAGGATGTGAAACTTGGAAATCTATCACTACCTGCAGGAATACGCGTTACCATgccaatattatttattcaccTTGATCCTGATATCTGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTCTCTGAAGGAATTGCTAAGGCAACAAAGGGCCAAGTTTCGTTTTACCCATTTGGATGGGGTCCTAGAATATGTATTGGCCAAAACTTTGCCTTATTGGAAGCCAAGATAGTGTTGTCACTGCTTCTGCAACATTTCTCATTTGACCTTTCTCCAGCCTATGCACATGCTCCAACGGTTGTGCTTAGTTTGCAGCCAAAACACGGGGCACACATCGTTTTGCATAAATTATGA 1563 0.4152 MEQLFSSPAAIWVVSVIVAVIHLWALHMLNSLWLRPKRFERLLRAQGLQGDPYSLSCRNSNHTHMQQHEPKSQPFALSNDVAPRVFTSLYHTIAKYGKNSFFWEGTTPKVIITDPQQIKEVFNNIHDFQKPKLSGNAKFLIDGLINYEGEKWAKHRRIINPAFHLEKLKNMLPAFSQSCHDMISTLEGMLSLDGKCEIDVWPFLQNLTREVISRTAFGSSYAEGEKIFELLKMQGYLWMTAQYKNTPILRHLSTSTNKRMRAIQRDMHDSIDVIIKKRGKAMKDGETCNKDLLSILLESNQMEIQGHGNSRTVGMTNQEVIEECKLFYLAGQETTSSLLVWTMILLGRYPEWQTRARQEVLQVFGNQNPNFDGLSQLKIVTMILYEVLRLYPPAVFFSRALQKDVKLGNLSLPAGIRVTMPILFIHLDPDIWGDDAKEFKPERFSEGIAKATKGQVSFYPFGWGPRICIGQNFALLEAKIVLSLLLQHFSFDLSPAYAHAPTVVLSLQPKHGAHIVLHKL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1776 520 SUPERFAMILY Cytochrome P450 84 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS E-class P450 group I signature 319 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS E-class P450 group I signature 339 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 14 516 - -
Ssu3g1776 520 Gene3D Cytochrome P450 65 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 14 516 - -
Ssu3g1776 520 PRINTS P450 superfamily signature 330 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1776 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Ssu3g1776 520 Pfam Cytochrome P450 94 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1776 Ssu-Chr3 55007242 55011984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1776 13 520 Cytochrome P450 AT3G14690 50.000 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1776 - K17873 gmx:100790445 863.988