Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1763 ATGGAGGCGTCATTGCAGGAGAAAGATTGCAGAACAACGCAGGAGGAAGAAGAATTATGTGATTCTGATTATGAAAAAGGTGATGATTCAGCAAGGGCATTGGTCGAGCGTACTGggacttatttttcttctagcCTTGGACTTGGTACCACCATCTACACTTCTCGCTTTGCTGCTAATGCACTTCGTGCTCATAGGCTTCATGGTTCAAGTTCCAGGGACATGATCAGACTCCAAAAGCCCCCGGAACCTGACTTCAGTGATCTTGATGAAAACTAA 279 0.4265 MEASLQEKDCRTTQEEEELCDSDYEKGDDSARALVERTGTYFSSSLGLGTTIYTSRFAANALRAHRLHGSSSRDMIRLQKPPEPDFSDLDEN 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1763 92 MobiDBLite consensus disorder prediction 69 92 - -
Ssu3g1763 92 MobiDBLite consensus disorder prediction 1 17 - -
Ssu3g1763 92 MobiDBLite consensus disorder prediction 69 86 - -
Ssu3g1763 92 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1763 Ssu-Chr3 53998773 53999051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1763 51 86 Ion Channels AT1G15990 70.270 1.81e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1763 K05391 - gmx:100810453 117.472