Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1639 ATGAGCCTTCTGCGAACAGCTGTGTGTTGTGTATTGGTTGTGCTTGGTGCACTACCATTCTCTTCAGATGCACAGCTAGAACCCTCCTTTTACAGGGAGACATGTCCCACTGTGCATTCTATTGTACGTGAAGTCATTAGAGACGTTTCAAAATTAGACCCCCGTATGCTTGCTAGTCTCATAAGGCTACACTTTCATGACTGCTTCGTTCAAGGCTGTCATGGATCAATTCTTTTGAACAACACGGCTACGATCACGAGCGAGCAAAATGCAGCGCCCAATAACAACTCAATAAGAGGTTTGGATGTTGTGAACCAGATCAAGACCGCGGTGGAAAATGCTTGTCCTGGCATAGTTTCTTGTGCTGATATTCTTGCCCTTGCTGCTGAAGTATCCGTTGTTCTGGCTAATGGTCCTGACTGGGAAGTTCCATTGGGCAGAAGGGATAGTTTAACAGCAAACTTGGCACTTGCTGGTAAAAATATTCCATCTCCATTCCTCAACCTTACTCAACTCAAATCCTCATTTGATTCTCATGGCCTCAACACTACTGATCTAGTGGCACTCTCAAGTGCTCATACATTTGGCAGAGCTCACTGCAGATTATTAGTTGACCGATTATATAATTACAGCGGCTCTGGCAACCCTGATCCAACTCTTAACGGAACTTATTTGCAAAAGCTTCGGGCAATATGCCCCAATCGTGGACCTGGCACTATCCTCGCCAACTTTGACCCAACCACACTTGACACACTTGACAACAACTACTACTCCAATCTTAAGGTTCACAAGGGCTTGCTTCAGAGTGACCAAGAGCTGTTTTCCACAACCAGTGCTGATACCATTGACATTGTCAATAGGTTCAGTAGTAACCCAACTCTTTTCTTTGAGAGCTTTAAGGCTGCAATGATAAAAATGGGTAACATTGGAGTGCTAACAGGTTCTCAAGGAGAAATCAGACATCAATGTAATTTTGTTAATGGGAATTCCGTTGGAATGTATTTGTAA 1008 0.4375 MSLLRTAVCCVLVVLGALPFSSDAQLEPSFYRETCPTVHSIVREVIRDVSKLDPRMLASLIRLHFHDCFVQGCHGSILLNNTATITSEQNAAPNNNSIRGLDVVNQIKTAVENACPGIVSCADILALAAEVSVVLANGPDWEVPLGRRDSLTANLALAGKNIPSPFLNLTQLKSSFDSHGLNTTDLVALSSAHTFGRAHCRLLVDRLYNYSGSGNPDPTLNGTYLQKLRAICPNRGPGTILANFDPTTLDTLDNNYYSNLKVHKGLLQSDQELFSTTSADTIDIVNRFSSNPTLFFESFKAAMIKMGNIGVLTGSQGEIRHQCNFVNGNSVGMYL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1639 335 SUPERFAMILY Heme-dependent peroxidases 25 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 Pfam Peroxidase 42 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 Gene3D Peroxidase, domain 2 163 306 - -
Ssu3g1639 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Ssu3g1639 335 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 Gene3D - 30 327 - -
Ssu3g1639 335 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601|GO:0042744
Ssu3g1639 335 PANTHER PEROXIDASE 72-RELATED 5 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ssu3g1639 335 PANTHER PEROXIDASE 5 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1639 Ssu-Chr3 47140086 47141973 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1639 8 328 Peroxidase AT5G06720 57.632 3.06e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1639 K00430 - gmx:112997600 542.732