Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1624 ATGGACCAAAACATGTTACCATTTGTTCTTTTAGCTTTTCCCATCTtgctattcttcttcttcttccgaAAACACAAAACATCTAAGAAGCCAACCCTTCCACCAGGCCCTAGAGGCCTTCCCTTCATTGGCAATCTCTATCAACTCGATAGTTCTACTCTTTGTTTGAAACTCTACGAACTCTCAAAAAAATATGGCCCCATCTTTTCCCTTCAACTGGGTTCAAGGTCAGCCGTTGTTGTCTCCTCACCAAAACTCGCCAAGGAGGTAATGAAAACCCATGACCTTGAGTTCTGTGGTCGACCTTCCCTCATAAGCTCaatgaaattttcatataatggGCTAGACATGGCATTTTCACCCTATAGAGATTATTGGAGACACACGAGAAAAATTTCCATTATCCATTTCCTTAGCCTCAAGCGTATCTtaatgttttccttaataagAAAATACGAGGTTACCCAATTGGTCAAAAAGATAACGGAACGCACTTTTTGTTCCAAGGTTACCAACTTGCATGAGTTGCTGACGTGTCTCACGAGCACTATAGTGTGTAGGACTGCCTTGGGTAGAAGGTACGAAGAGGAAGGGATCGAGACAAGCATGTTCCATGGCCTGCTTAAAGAAGCGCAGGAATTGATAGTTTCCACCTTCTACACAGATTATATTCCTTTAGTCGGGGGAGTGGTTGATAAACTTACTGGATTGATGGCTCGTCTTGAGAAAATGTTCAAGGTGCTGGATGGGCTTTATCAGAATGTTATTGATGAACACCTTGATCCTGAAAGGAAGAAACTTGCAGATGAAGAGGATATAATCGATGCCTTGCTTCAATTGAAGAATGATCGTTCCTTCTCAATGGATCTCACTCCCGGTCACATCAAACCCTTGATCAtgAATATAATTTTGGCAGGGACAGATACAAGTGCAGCCGCAGTAGTTTGGACCATGACGGCACTAATGAAGAACCCGAGAGTAATGAAGAAAGCTCAAGAAGATATTAGAAATGTGTTTGGTGGGGAAGGTTTTATAGAAGAAGACGACATCCAAAAGCTTCCTTATCTTAAGGCTGTTATAAAAGAAACAATGAGATTGTACCCACCATTGCCTCTTCTACTACCAAGAGAAACAATTAAAAGGTGTAGCATTGCAGGGTACGAAATTCCAGAGAAGACATTGGTGTATGTGAATGCTTGGGCAGTGCATAGAGACCCTGAAACATGGAAGGAGCCAGAAGAGTTTTATCCTGAGAGGTTCCTAGACAGCACAATAGATTTTAGGGGATATGATTTCGAGCTGATTCCATTTGGATCTGGCCGAAGGATTTGCCCCGGCATACATATGGGAATTATCACAGTGGAGCTTGTGCTTGCTAATCTTCTGTATTCATTTGATTGGGAAATGCCTGAAGGGATGAAAAGGGAAGACATAGACACAGATATGCTTCCAGGACTTATCCAACACAAGAAAAATCCTCTCTGCCTTGTTGCTAAGAAGCGAGTGTGA 1509 0.4082 MDQNMLPFVLLAFPILLFFFFFRKHKTSKKPTLPPGPRGLPFIGNLYQLDSSTLCLKLYELSKKYGPIFSLQLGSRSAVVVSSPKLAKEVMKTHDLEFCGRPSLISSMKFSYNGLDMAFSPYRDYWRHTRKISIIHFLSLKRILMFSLIRKYEVTQLVKKITERTFCSKVTNLHELLTCLTSTIVCRTALGRRYEEEGIETSMFHGLLKEAQELIVSTFYTDYIPLVGGVVDKLTGLMARLEKMFKVLDGLYQNVIDEHLDPERKKLADEEDIIDALLQLKNDRSFSMDLTPGHIKPLIMNIILAGTDTSAAAVVWTMTALMKNPRVMKKAQEDIRNVFGGEGFIEEDDIQKLPYLKAVIKETMRLYPPLPLLLPRETIKRCSIAGYEIPEKTLVYVNAWAVHRDPETWKEPEEFYPERFLDSTIDFRGYDFELIPFGSGRRICPGIHMGIITVELVLANLLYSFDWEMPEGMKREDIDTDMLPGLIQHKKNPLCLVAKKRV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1624 502 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 3 501 - -
Ssu3g1624 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Ssu3g1624 502 Gene3D Cytochrome P450 26 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 Pfam Cytochrome P450 34 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PANTHER CYTOCHROME P450 71B11-RELATED 3 501 - -
Ssu3g1624 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1624 502 SUPERFAMILY Cytochrome P450 34 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1624 Ssu-Chr3 45876055 45878401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1624 20 502 Cytochrome P450 AT4G31500 47.531 8.23e-162 466