Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1554 ATGCCTAATGAGGTGCTTCACATAGACCCAGTTTGTGGTACGAATGACGTGACATACTGGTGTGGTTGTGTGGAGGCAACATATGTCGACATAGAGGTTGCTAAGTTAGGGTTCTGTGAAGTGGGGAATGGAGGAACGACATCGATTCTCAGGCAGGCATTGCTTTTGGTGCACATCGTGTGGCTCATTGTGTTAAGGTGTTATGGTTTTTGTTCTTTGCGGTTTCTTTTGCAAAGTGATTACACAACCATTCTTAGAGGAGGATGCTATCACAACGAAGACGGAGGAGGCTGCGATCGTGTTCTGTGGCTGAGGGTTAGGTGGCAAGGAGCAGAGCATGGCCACTGCCGCCCTCAACGAGGCCAATTCTGCGACACTTGCTTCGAGCTCTACTGCCGCAAGGAGGACGCCTCTGTTGCCGTCATTGCCACCAATTTCTGCGCCCCCAACTACGGCTTCAGTGCCGAGAGCGTCGTCGAACACTATAGCCTCTTGAGCAACACTTCGTGCTCCCCATTGAGGTCTTTGAGAAAATTGGAAGTGAGAGAATTTGAATCCCCTAAAATGCTACCAATGGCAACAAATCCAATCACAATGGGGAATGGCAATGTCACCCCAAACCCTGATGAGAGTACTAAATCCTTTGTGTACCTACCAAACATGGACGAGCCCAAATTCGATGTCCCTCTAAAGGAGTGCCAACATGTCATGGACAACCTCGACACCAACATCAGTGATTTCATCAAGCTCTCCAAGTTTGCCATCTTTTTGCACTTCAACATCGCAGATGGAGGAGGCACAAAGCTCCACAACACCTTCTCTAAAGCCTCCCTGTCATCAACCAAGCACGCACCATCAAGCTTCTTCAGTAACAAGTCAGAACGGTCCAATTTAGATTCAAAGTATTTGGACTAA 915 0.482 MPNEVLHIDPVCGTNDVTYWCGCVEATYVDIEVAKLGFCEVGNGGTTSILRQALLLVHIVWLIVLRCYGFCSLRFLLQSDYTTILRGGCYHNEDGGGCDRVLWLRVRWQGAEHGHCRPQRGQFCDTCFELYCRKEDASVAVIATNFCAPNYGFSAESVVEHYSLLSNTSCSPLRSLRKLEVREFESPKMLPMATNPITMGNGNVTPNPDESTKSFVYLPNMDEPKFDVPLKECQHVMDNLDTNISDFIKLSKFAIFLHFNIADGGGTKLHNTFSKASLSSTKHAPSSFFSNKSERSNLDSKYLD 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1554 304 MobiDBLite consensus disorder prediction 281 296 - -
Ssu3g1554 304 MobiDBLite consensus disorder prediction 281 304 - -
Ssu3g1554 304 PANTHER SERINE PROTEASE INHIBITOR, KAZAL-TYPE FAMILY PROTEIN 6 71 - -
Ssu3g1554 304 SUPERFAMILY Barwin-like endoglucanases 120 152 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1554 Ssu-Chr3 41777757 41788128 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1554 119 197 Expansin Gene Family AT3G03220 31.765 9.21e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1554 - - gmx:100777832 92.8189