Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1459 ATGATGAACTTCCAAGCTTGTTCAATCACCATCTCAAAGCTGTTCTTCTGtgtttgtgtctttttttttttaccaaccaTAGCTTTAGGAGATTGCACATGTGACACAGAAGAGGCCAAAAAGAGTGACCCAAGTGAAGTCCTCCACTACAAAATTGGCTCAATTGCTTCCGTGCTTGTTGCTGGGGCTCTTGGGGTGAGTCTCCCATTTTTGAGCAAGAGAATCCTAACCTTGAATCCCAAGAATGACATATTCCTGATGGTCAAGGCCTTTGCTGCAGGGGTGATTCTGGCAACTGGGTTTGTCCACATACTGGATTCCAGATGCATTTGA 333 0.4174 MMNFQACSITISKLFFCVCVFFFLPTIALGDCTCDTEEAKKSDPSEVLHYKIGSIASVLVAGALGVSLPFLSKRILTLNPKNDIFLMVKAFAAGVILATGFVHILDSRCI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1459 110 Pfam ZIP Zinc transporter 49 106 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu3g1459 110 PANTHER ZINC/IRON TRANSPORTER 16 106 - -
Ssu3g1459 110 PANTHER METAL TRANSPORT PROTEIN 16 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1459 Ssu-Chr3 37914367 37914699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1459 31 105 Inorganic Solute Cotransporters AT3G12750 58.667 3.60e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1459 K14709 - gmx:100794874 161.77