Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1458 ATGTTGTCCTCTATAGGGACCTTAATGGTGGACTCATTTGCCACAGGGTTTTATCATAGGCAACATTTTAATTCCTCAAAGCGGGTTCCTGCTGATGAACAAATGGAGGATGAACATGCTGGTCACATACATGTTCATACACATGCCACACATGGTCATGCTCATGGATCAGCCATCTCTTCTGAGGGTTCAATAACATCTGAACTAATTAGGCAGCAAATCATATCACAAGTGTTGGAGATAGGAATAGTGGTCCATTCAGTGATCATTGGAATATCACTGGGCACTGCAGGGAGCATGAATACCATAAAGCCTCTCCTGGCTGCCCTTTCCTTCCATCAATTTTTTGAGGGGTTGGGGCTTGGTGGTTGCATATCTCAGATATTGCAATTTGGTTGGTAG 402 0.4378 MLSSIGTLMVDSFATGFYHRQHFNSSKRVPADEQMEDEHAGHIHVHTHATHGHAHGSAISSEGSITSELIRQQIISQVLEIGIVVHSVIIGISLGTAGSMNTIKPLLAALSFHQFFEGLGLGGCISQILQFGW 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1458 133 PANTHER ZINC/IRON TRANSPORTER 1 128 - -
Ssu3g1458 133 PANTHER METAL TRANSPORT PROTEIN 1 128 - -
Ssu3g1458 133 Pfam ZIP Zinc transporter 1 127 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1458 Ssu-Chr3 37913545 37914299 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1458 1 126 Inorganic Solute Cotransporters AT3G12750 67.442 2.62e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1458 K14709 - gmx:100805124 184.111