Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1457 ATGGACGAAattttaaggGCAAAGTTCGAGTCCAAGTCTACGGCAATTATGGCAACCTTTTTCTCCCTAACAACCCCAATTGGGATAGCAATTGGAATAAGGGTATCAAGTGTGTCCAAAGAGAATAGCCCAACTGCTTTAACTGTTGAAGGGGTTTTCAATTCTGCTTCTGCTGGAATTTTGATTTACATAGCATTGGTTGATCTGCTAGCAGCAGATTTTATGAACTCAAGGTTGCAGAAAAATTTGAAGCTCCAACTAGGGGCAAATATCTCACTTCTTTTAGGTGCAGGTTGCATGTCTGTATTGGCCAAATGGGCTTGA 324 0.4043 MDEILRAKFESKSTAIMATFFSLTTPIGIAIGIRVSSVSKENSPTALTVEGVFNSASAGILIYIALVDLLAADFMNSRLQKNLKLQLGANISLLLGAGCMSVLAKWA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1457 107 Pfam ZIP Zinc transporter 4 104 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu3g1457 107 PANTHER ZINC/IRON TRANSPORTER 4 107 - -
Ssu3g1457 107 PANTHER METAL TRANSPORT PROTEIN 4 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1457 Ssu-Chr3 37912643 37913390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1457 4 107 Inorganic Solute Cotransporters AT2G32270 59.615 5.53e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1457 K14709 - gmx:100805124 177.563