Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1439 atgagagagcaaagagTGGAATCGTTCTACGCAAAGCTTCGCGACTCCGCAATAtcatcttcctcttcttctccgGTTCTCATTTTCCCCTCGACCTCCGACGCGGACTCGCTCTGCGCGCTCAAAATCATCTTCCACGTCCTCGAATCCGATTCCATCCAATACGCGTGCTACCCGGTGTCGTCCTTCCACGAGATCCACAAATACACCTCGCCGGCGTCAAACGACGAGCCACTGTCCGTCGTTTTGGTCAACTGGGGCAACTCCAGAGACCTCCGCAGAGCGCTGAACCTCGGCCCCAACGCGCGCGTCTTCGTCGTCGACAGCCACCGCCCCGTCCACCTCCGCAACCTCAGCGACCAAAACGACGCCGTTGTGGTCCTCTTCACCAAAGACGACGAGCAGCAATCCGATCTCGCCTACGACTTCGACCTCACCACCCTCGCCAACGCCACAGCCGCCGCGGGCGACTCCGACTCCGAACCCGAATCCGAGTCCGAGTCCGAATCCGATGACGACGAAGGCGACAGAAACGGATCCAGGAAGAGGAGAAAGAGGAATTCCGAAGAAGAGGAAGACCCGATTAGAGTCTACCGGAAGCTGAAGAAGAACTATTACCGATTGGGAACGTTCCACGGGAAGCCCTCCGGGTGTTTGATGTATGAACTCGCTCACTTCCTCCGGAAGAACACGAACGAGTTGCTCTGGCTCGCGTGCATTTCCCTCACGGATCAGTTCCTGCACGAGAGGTTAAGCGACGAGAGGTACCAGGACGGGGTGATGGAGCTCGAGCAGCACATTAACAGTTCCGGCAATTTGGACGCGGTTACTTCGGTTACTCTCAAGGACGGTACCAAAATTCGTGCCCCGAATTCGTCGCGAATCACCTACGAGGACCAGCCGAGGCTCATGCTGCTGCAGGAGTGGAGCCTCTTCGACTCCATGATGTGCTCCTCGTACGTTGCCACCAAGCTGAAGACGTGGAGCGAGAACGGGATGAAGAAGCTGAAGCTTCTCCTGGCGAGGATGGGATTCGCCTTTGCCGATTGCCAGCAGAAGTTCCAGCACATGAACGTGGAGGTGAAGCGCAAGATGAAGAACGAGTTTGAGCGGCTTCTGCCCGAGTATGGACTCACTGATTTTTACTACAGGAGTTTCTTGAGGACGCTCAAGTATAATTCTAAGGTCTCTGCTGCGGATGTGGTGTACGGCGTGACCGCGTTGCTTGAGTCTTTTGTGAAATCGGATGGTTCTTGTGCTTCCAAGCAGTTTGGTGTGGCCTATGATGCGCTCTCTTTGGACAATATTGACAAGTTGAAAAGCGGGATGCAGCACGCTATTAAGATTCAGAGGGCCATTTTGAGGCAAGGGAGTGCTGCGATTACTAAGAATGGGTGTATAAGGAGTGGGAGGAGTTTCCGGTGGCTGAAGCTTGAGGATTCGAGTGATGCTAAGTTCTTGGGGTATCCTCAGGCATTGACTAAGTTCTGCTATTTTCTTATGGATGCTTTGAAAGAGAAGGGGGCAACGATGAAGCCTCTTCTTTGTGCTTGCTTGTCTCAGGAGCCTGGGAAGGTGCTGATTGTGGGGGTTTGTGGGAGGCCGCGTTTGGCTGGGGCTCGGGGGAACGCATTTGGGATTGCGTTTAGAACTGCAGCAGAGGAGATTGGAACTGAGTTCTTCCATGAGTTATTTGAATCGTCGTGGATTGTTCTGGATGCTTCTGCTGTGAATTCCTTCATGGTTAGGTTGATTGAAAAGCTGTGA 1767 0.5269 MREQRVESFYAKLRDSAISSSSSSPVLIFPSTSDADSLCALKIIFHVLESDSIQYACYPVSSFHEIHKYTSPASNDEPLSVVLVNWGNSRDLRRALNLGPNARVFVVDSHRPVHLRNLSDQNDAVVVLFTKDDEQQSDLAYDFDLTTLANATAAAGDSDSEPESESESESDDDEGDRNGSRKRRKRNSEEEEDPIRVYRKLKKNYYRLGTFHGKPSGCLMYELAHFLRKNTNELLWLACISLTDQFLHERLSDERYQDGVMELEQHINSSGNLDAVTSVTLKDGTKIRAPNSSRITYEDQPRLMLLQEWSLFDSMMCSSYVATKLKTWSENGMKKLKLLLARMGFAFADCQQKFQHMNVEVKRKMKNEFERLLPEYGLTDFYYRSFLRTLKYNSKVSAADVVYGVTALLESFVKSDGSCASKQFGVAYDALSLDNIDKLKSGMQHAIKIQRAILRQGSAAITKNGCIRSGRSFRWLKLEDSSDAKFLGYPQALTKFCYFLMDALKEKGATMKPLLCACLSQEPGKVLIVGVCGRPRLAGARGNAFGIAFRTAAEEIGTEFFHELFESSWIVLDASAVNSFMVRLIEKL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1439 588 MobiDBLite consensus disorder prediction 152 193 - -
Ssu3g1439 588 PANTHER CDC45-RELATED PROTEIN 2 587 IPR003874 GO:0006270
Ssu3g1439 588 MobiDBLite consensus disorder prediction 174 193 - -
Ssu3g1439 588 PANTHER - 2 587 - -
Ssu3g1439 588 Pfam CDC45-like protein 26 412 IPR003874 GO:0006270
Ssu3g1439 588 Pfam CDC45-like protein 416 586 IPR003874 GO:0006270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1439 1 588 Core DNA Replication Machinery Family AT3G25100 71.333 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1439 K06628 - gmx:100777346 977.237