Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1431 ATGGGTAAGATTGAACTAGTTGAGAAAGTTGTAATTGCTCCTGAGCAACCTACACCCAGAAAGAGAATGTTCTTGTCAAATATTGACTTGTCCCTTGTTGTTTACCAAGACTCTGCCTCCTTTTTTGATCCTCCAAGCAGCCAAATGAGCTTTAGTGAGATTTGTAGCAAATTATACAGTGCACTTAGTAAAATGCTTGTGCAGTATGACTTTATGGCTGGCCGGCTAGTGCCAAGTTTGGAGGAAAATCATCGATTTGAAATAGACTGTAATGGTGCTGGTGTTGTCGTTGCGGCTGCTAGAACTGACAGAAAATTGAGTGAATTTGGTGTGATTTCTGCACCTAATGCGGAGTTAAGGGAACTAGTTGTTTTCTTGCATGGAGAGGGTGATCAAGAAACTGATGTGAAAGAAAGGCCCCTTGCATCCTTACAGCTGACTCAGTTTGGCTGCGGAAGTTTGGCACTTGCTTCTCGCTACAACCACTGCACACTGGACGGTCTCGCAATCAGAGATTTTGAGGTAAATTTAGCTGCATTAACACGTGGTGATGACCTCATCATAGTACCCAATGCAGATAGGACACTGCTGAGAGCACGAAACCCCCCAAAGATATGCCATCCCCATTTTGAGTATTCAAAATCTACTGACACACATAACTTATTTACTCTCCAAGGCAAAAGTGGCACCAATGTTAGACAATCCTTGacagaaaatcaaattcacgTGCTTTATTTGGCATCACAAAAAATTGCCAGCTTCAAAAAGAAAGCCCTGAAGGCCAACAACTTAGAGAACACCACCACTTTTCAAGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGCATTGCAACAAGGATGCCAGAGGATAAAGTATCCACAATGCTGTTCCCAGTAGATGTTAGGAGAAGGGTTGTTCCTGAACTCCCAGATGGCTTTGCAGGCAACGCATTGGTGCCTGGTTTTGCAAGAGCAACTGTGAGGGAGCTCAGGGAACTAGAAGATGCATGTCACATAAGGAAAGTGCAAGAAGGGGTTGAAAGATTGGATGATGAGTACATTAAGTCAGGAATAGATTGGTTGGAGGAGAACAAAGGGGCACCTTGTGTGGAAGATAGTTTCTCCTTGGTGGCATGGTGGAGACTGGGGCTAGAGGAGCAACTTTTTGCATGGGGTAGACTAAAGTGTGCCACCCCACTTGCAGTTAAGCCTGGTTTGGTCATGCTGTTGCCAGGGCCACAAGATCAAGGGGGTCTTAACATATGCCTGGATTTGCCTGAGGATCAAATGCAAGAGTTTTGTAGGATAATGCTAGAAATTTAG 1323 0.4361 MGKIELVEKVVIAPEQPTPRKRMFLSNIDLSLVVYQDSASFFDPPSSQMSFSEICSKLYSALSKMLVQYDFMAGRLVPSLEENHRFEIDCNGAGVVVAAARTDRKLSEFGVISAPNAELRELVVFLHGEGDQETDVKERPLASLQLTQFGCGSLALASRYNHCTLDGLAIRDFEVNLAALTRGDDLIIVPNADRTLLRARNPPKICHPHFEYSKSTDTHNLFTLQGKSGTNVRQSLTENQIHVLYLASQKIASFKKKALKANNLENTTTFQVVAAKIWKARSIATRMPEDKVSTMLFPVDVRRRVVPELPDGFAGNALVPGFARATVRELRELEDACHIRKVQEGVERLDDEYIKSGIDWLEENKGAPCVEDSFSLVAWWRLGLEEQLFAWGRLKCATPLAVKPGLVMLLPGPQDQGGLNICLDLPEDQMQEFCRIMLEI 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1431 440 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 3 438 - -
Ssu3g1431 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 438 - -
Ssu3g1431 440 Gene3D - 2 214 IPR023213 -
Ssu3g1431 440 Pfam Transferase family 3 433 - -
Ssu3g1431 440 Gene3D - 230 440 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1431 Ssu-Chr3 36881109 36883504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1431 3 440 Monolignol Biosynthesis Gene Families AT5G48930 29.018 1.49e-59 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1431 K15400 - gmx:100801822 779.63