Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1421 ATGCTAGACATCCAAGGCTACCTTGTACTATTCCTTTTATGGTTCATATCCACCATTTTGATCAGATCCATCTTCAAAAAATCCCAATGTCTGAGACTACCCCCTGGCCCTCCAATTTCGTTACCACTCGTTGGACACACACCCTATCTCCGCTCCCTTCTTCACCAAGCATTATACAAACTCTCCAAACGCTATGGCCCCTTGATCCACGTCATGATCGGTTCCAAGCACGTGATCGTGGCGTCATCAGCGGAAACCGCGAAGCAGATCCTTAAAACCTCCGAAGAGGCCTTCTGCAACCGCCCCATAATGATCGCGAGCGAGAACTTGACCTACGGCGCCGCCGACTACTTCTTCATCCCGTACGGGACGTACTGGCGGTTCCTGAAGAAGCTCTGCATGACGGAGCTTCTCAGCGGGAAGACCCTGGAACACTTCGTGAGCATCCGCGAGAGCGAGATCGAGGCGTTCTTGAAGACGATCCTGGAGACTTCCGCGACGGGTAAGAATGTGGAGATGAGGCAAGAGCTCATAAGGCACACGAACAACATCATCACGAGGATGATAATGGGGAAGAAGAGCAACGGCGGTGACGATGAGGTAGCGCAGTTGAGGAAGGTGGTTAGGCAGGTTGGGGAGTTGCTTGGGGCGTTTAACTTGGGGGACGTGTTTGGGTTCATGAGGCCTCTGGATCTGCAGGGGTTTGGGAAGAGGAACATGGACACGCACCACAAGATGGATATGATGATGGAGAAGGTGCTGAAGGAGCACGAAGAGGCGAGGGCCAAGGCGGGTGCTGATAGTGATAAGAAGAAGGATCTTTTTGACATTTTGTTGAACCTGATTGAAGCTGACGGCGCTGACAATAAACTCACCAGAAAAAGTGCCAAAGCCTTTGCTCTGGACATGTTCATCGCCGGCACAAACGGGCCGGCGAGTGTTCTAGAATGGTCCCTGGCCGAGCTCGTGAGAAACCCCCACGTTTTCAAGAAGGCAAGAGAAGAGATTGATTCTGTGGTGGGCAAGGAGAGGCTCGTCAAAGAGTCAGACATCCCCAACTTACCTTACCTCCAAGCAGTGGTCAAGGAAACTCTGAGGCTGCACCCGCCAACCCCAATATTCGCACGAGAAGCCATGAGAGCATGCCAAGTTGACGGCTACGACATTCCCGCGAACTCAACCATCTTGATCAGCACGTGGGCCATTGGCAGAGACGGAAACTACTGGGACAACGCGCTGGAGTATAACCCAGAGAGGTTCTTGTTCGCGGATGGACCTGGCAAGAGCAAAATAGACGTGAGGGGGCAATACTACCAACTCTTGCCGTTCGGGAGCGGAAGAAGAAGCTGCCCCGGGGCTTCGCTTGCGTTGCTGGTCATTCAAGCGACGCTCGCGAGCTTGATCCAGTGCTTCGATTGGGTGGTGAATGACGGGAAGAATCACGACGTTGATATGACGGAGGAAGGAAGGGTGACTGTGTTTTTGGCCAAGCCACTCAAGTGCAAGCCTGTTCCACGTTTTACTCCCTTCTCTGCCTGA 1539 0.5296 MLDIQGYLVLFLLWFISTILIRSIFKKSQCLRLPPGPPISLPLVGHTPYLRSLLHQALYKLSKRYGPLIHVMIGSKHVIVASSAETAKQILKTSEEAFCNRPIMIASENLTYGAADYFFIPYGTYWRFLKKLCMTELLSGKTLEHFVSIRESEIEAFLKTILETSATGKNVEMRQELIRHTNNIITRMIMGKKSNGGDDEVAQLRKVVRQVGELLGAFNLGDVFGFMRPLDLQGFGKRNMDTHHKMDMMMEKVLKEHEEARAKAGADSDKKKDLFDILLNLIEADGADNKLTRKSAKAFALDMFIAGTNGPASVLEWSLAELVRNPHVFKKAREEIDSVVGKERLVKESDIPNLPYLQAVVKETLRLHPPTPIFAREAMRACQVDGYDIPANSTILISTWAIGRDGNYWDNALEYNPERFLFADGPGKSKIDVRGQYYQLLPFGSGRRSCPGASLALLVIQATLASLIQCFDWVVNDGKNHDVDMTEEGRVTVFLAKPLKCKPVPRFTPFSA 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1421 512 PANTHER BETA-AMYRIN 24-HYDROXYLASE 2 511 - -
Ssu3g1421 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Ssu3g1421 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 511 - -
Ssu3g1421 512 Pfam Cytochrome P450 34 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 SUPERFAMILY Cytochrome P450 34 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g1421 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1421 Ssu-Chr3 36690108 36695021 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1421 1 506 Cytochrome P450 AT5G06900 41.373 2.72e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1421 K24188 - gmx:100037459 921.383