Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1392 ATGGGTGGGGAGCGCAAGGTCTACACTTTGGCTGAAGTATCTGAGCACAACAACTCCAAAGATTGCTGGCTTATCATTGATGGCAAGGTTTATAATGTCACAAAGTTCTTAGATGACCATCCTGGTGGGGATGATGTCTTGCTGTCTTCCACAGCGAAAGATGCCACTGATGACTTTGAGGATGTTGGTCATAGTAACAATGCTAGAGCCATGTTGGATGATTTTTATGTTGGAGACATTGATCCAGCAACCATCCCTGCCAAGGTTCAGCACACTCCTCCAGAACAACCTCAAAATAATCTGGACAATACATCATCAGACTTCATGATCAAGATGCTCCAGTTTCTAGTTCCCCTGATTATCTTGGGTTTTGCGGTTGGATTTCGTTTCTACAACACCAAATCAACATAG 411 0.4355 MGGERKVYTLAEVSEHNNSKDCWLIIDGKVYNVTKFLDDHPGGDDVLLSSTAKDATDDFEDVGHSNNARAMLDDFYVGDIDPATIPAKVQHTPPEQPQNNLDNTSSDFMIKMLQFLVPLIILGFAVGFRFYNTKST 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1392 136 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 89 IPR036400 -
Ssu3g1392 136 PANTHER CYTOCHROME B5 1 133 - -
Ssu3g1392 136 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Ssu3g1392 136 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Ssu3g1392 136 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Ssu3g1392 136 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Ssu3g1392 136 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Ssu3g1392 136 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Ssu3g1392 136 SMART Cyt_b5_2 8 81 IPR001199 -
Ssu3g1392 136 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Ssu3g1392 136 Gene3D - 3 84 IPR036400 -
Ssu3g1392 136 PANTHER CYTOCHROME B5 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1392 Ssu-Chr3 35305567 35308475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1392 1 132 NADPH P450 reductases AT5G48810 65.414 6.33e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1392 K23490 - gmx:100798640 241.506