Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1389 ATGGGGAAGTACATGAGGAAGTCCAAAATCGCCGGCGACGTCGCCGCCGTGATCATGGAGGCACCGCCGCCGCCGCACCTCGGCGTCCGCACCCGCGCCAAGACCCTCGCCCTCCAGAAGACCTCCCCGCAAATTCCGGACCCCTCCGCCTACCTCCAGCTCCGCAGCCGCCGCCTCCTCAAGCTCCAGCCGCCGGAAAAGCCCCGCCGCTGCGCCGCCGACACCGCCGTCGCCAATTCCCGCCTCGCGCACGGCCTCGCCAAAACGGCGTTGTCACGCAGCGCCGAAAAGTTTCAACCTTTCGAAGACTACAACGCTGAGTGCTCCTTCGGCGAAAATTTCTTGGACGTCGAAGGCAGAGAAGAAAGAAGCACCAGGGAAAGCACACCTTGTAGTTTAATAAGGGATTCAAATGCCATTCATACCCCTGGTTCAACCACAAGGCAAAGGAGGCACCATATAATCCATGAACACATTCAAAGAAATATTCCAACAGCTTATGAGATGGAGGAGTTCTTTGCTTATGCAGAGAAGCAGCAACAAACAATATTTATGGACAAGTACAATTTCGACATTGTCAATGAAGTACCTCTGCCTGGACGGTACGAATGGGTCCCAGTACTCCACTAG 630 0.5571 MGKYMRKSKIAGDVAAVIMEAPPPPHLGVRTRAKTLALQKTSPQIPDPSAYLQLRSRRLLKLQPPEKPRRCAADTAVANSRLAHGLAKTALSRSAEKFQPFEDYNAECSFGENFLDVEGREERSTRESTPCSLIRDSNAIHTPGSTTRQRRHHIIHEHIQRNIPTAYEMEEFFAYAEKQQQTIFMDKYNFDIVNEVPLPGRYEWVPVLH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1389 209 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 1 208 - -
Ssu3g1389 209 PIRSF CKI_KRP_plant 1 209 IPR044275 GO:0004861|GO:0045736|GO:0051726
Ssu3g1389 209 Pfam Cyclin-dependent kinase inhibitor 161 207 IPR003175 GO:0004861|GO:0005634|GO:0051726
Ssu3g1389 209 Gene3D p27 157 209 IPR044898 -
Ssu3g1389 209 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 208 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1389 Ssu-Chr3 35248037 35251468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1389 1 207 Core Cell Cycle Gene Families AT5G48820 43.096 9.04e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1389 - - gmx:100782379 300.827