Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1380 ATGAACTTGATTGAAATGTGGGGATACTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCAGAAAATCTCTCGTCTAACACACTTGATTGGAGTAAGAGATATAACATTGCTCTTGGAACGGCCAGAGTTCTAGCGTATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTAATTATCAGCCCAAGGTAGCAGATTTTGGCTTGTCCAAGCTATTAAACAGAAATAATCTTAACAATTCAAGTTTTTCAATGATCAGAGGAACCAGAGGATATATGGCACCTGAGTGGGTTCTCAACTTAGCAATCACCTCCAAGGTTGATGTATACAGCTATGGGATTGTTCTATTGGAGATGATAACCGGGAAGAGCCCAACAACCGTTGTCCAAAACATTGATGGAGAAGACTCATATAATGGAAGGCTGGTAACGTGGGTGAGAGAGAAAAGGAGTGGCACATCTTGGCTAGAGCACATCATTGATCCtgcaattaaaacaaattatgatgAATGTAAGATGGACCTTTTGGCTAAAGTGGCTTTGGACTGCGTGGAGGAGGACAAAGATATAAGGCCAACCATGAGCCAAGTGGTAGAAATGCTTCAAAGCCATGAAAGTGATCCTCAGTAA 690 0.4072 MNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLLNRNNLNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVLLEMITGKSPTTVVQNIDGEDSYNGRLVTWVREKRSGTSWLEHIIDPAIKTNYDECKMDLLAKVALDCVEEDKDIRPTMSQVVEMLQSHESDPQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1380 229 Pfam Protein kinase domain 2 219 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g1380 229 PIRSF ILK 1 227 - -
Ssu3g1380 229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 64 76 IPR008271 GO:0004672|GO:0006468
Ssu3g1380 229 Gene3D Transferase(Phosphotransferase) domain 1 24 229 - -
Ssu3g1380 229 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 226 - -
Ssu3g1380 229 Gene3D Phosphorylase Kinase; domain 1 1 23 - -
Ssu3g1380 229 SMART serkin_6 2 221 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g1380 229 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 226 - -
Ssu3g1380 229 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g1380 229 SUPERFAMILY Protein kinase-like (PK-like) 2 222 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1380 Ssu-Chr3 34937948 34938637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1380 3 221 Receptor kinase-like Gene Family AT3G58690 38.767 4.55e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ssu3g1380 Pkinase 3.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1380 - - gmx:100784287 436.417