Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1317 atggtggGGCCCATTATcaagaGTGACAATTGCAGGGACGGTGGTGGCAATGATAGTGGCGGTGATGGTGGCGATGGCGGTGATGACAAATATGGTGGTGGAGACAatgataatggtggtggcagtgacaatggtggtgataaCGATAGTGATGGTGACAGTGACGATGAGGGTGAAGGTAGCCACAACAGTGATAACGACGATGACAGTGGTGGTAACAACGACgataatggtggtggcagcattgacgacgatggtggtggtggtgacgataaCAGTAACGGCGGCGGCAGTGGTGATGACAATGACGATGGGTCCCTCTCCATTCCCATTCTCCCTCCCGCCATGCCTTCATCATCCTCTCCCGCTCTTGCCACTCCCAATTTCCGTCACCGTGCTCTCAGAATCTGGTCCTCTAAGGACTACGTCATCGCCGCATTCATCTTCCTCGTCCTCTTCTCTCTCGCTCTCTTCTCCCGCTTGGATCCCGATTCCCACTCCCACTCCCACTCCCACTCCGACCTCGTTCCCTTAACCATCCTCCGCAACGCCAACGAAACGCGCGCGCTTTGCTTGGACGGGAGCGCCCCAGGGTACCATTTCCGAAGCGGGTTCGGATCCGGATCACGCAATTGGGTGATCCACGCCGAGGGTGGAGGGTGGTGCAATACGATATCTTCATGTTCTCAGCGAAAATTCACTAATTTGGGGTCTTCCAAGTATATGGATAAACTGCTTCCTTTTGCTGGAATATTGAGCTCTGACCCCGCTCAAAACCCTGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCATTTGCTGGTCATCCGGAGAGTGAGAGAGGAAGTGGTTTGTTCTTCAGAGGCCAGATCATATGGGAAGCTATTATGGATGAACTCTTATCAATGGGCTTGTCTAAAGCAAAGCAGGCTTTGCTTTCAGGATGCTCTGCCGGAGGGTTGGCAACTCTTATGCACTGTGATAACTTCCGACAATTATTTCTAAAGGAAACAACTGTCAAGTGTCTTGCTGATGCAGGCTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCTTTCTATCATGATGTTGTCGAACTTCAGGGTCTTGCAAAAAGTTTGCACAAAGATTGCATTGCTAAAATGGAACCATTTAAGTGTCTCTTTCCATCAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGGTTATGATTTCTGGCAGatACGCAATATTTTGGTACCTCAAGGATCAGATCCCCATGGTCACTGGCAAAGCTGCAGGATGAACATTCGCAATTGTAATGCTAACATGATTGATAAGCTTGACCGTTTCCGTGGCTCTTTGCTGATGACTGTGAATGAATTCCAACAACGAAAGGAGATTGGAATGTTTATAGATTCCTGCTTCATCCATTGCCAGACTGAGATGGAAGTGACATGGCACTCACCCAACTCTCCTAAAATAAACGGCAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGAGCGAGAAGCTGTAAAGCGTATTGACTGCTCTTCTTTTCCGTGCAATCCCACTTGCTACAATTTGGATTTCACCTGA 1626 0.4459 MVGPIIKSDNCRDGGGNDSGGDGGDGGDDKYGGGDNDNGGGSDNGGDNDSDGDSDDEGEGSHNSDNDDDSGGNNDDNGGGSIDDDGGGGDDNSNGGGSGDDNDDGSLSIPILPPAMPSSSSPALATPNFRHRALRIWSSKDYVIAAFIFLVLFSLALFSRLDPDSHSHSHSHSDLVPLTILRNANETRALCLDGSAPGYHFRSGFGSGSRNWVIHAEGGGWCNTISSCSQRKFTNLGSSKYMDKLLPFAGILSSDPAQNPDFFNWNKVKIRYCDGASFAGHPESERGSGLFFRGQIIWEAIMDELLSMGLSKAKQALLSGCSAGGLATLMHCDNFRQLFLKETTVKCLADAGFFLDEKDISGNSTMRSFYHDVVELQGLAKSLHKDCIAKMEPFKCLFPSEIVKNIKTPLFLVHPGYDFWQIRNILVPQGSDPHGHWQSCRMNIRNCNANMIDKLDRFRGSLLMTVNEFQQRKEIGMFIDSCFIHCQTEMEVTWHSPNSPKINGKTIAESVGDWYFEREAVKRIDCSSFPCNPTCYNLDFT 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1317 541 SUPERFAMILY alpha/beta-Hydrolases 280 428 IPR029058 -
Ssu3g1317 541 MobiDBLite consensus disorder prediction 48 63 - -
Ssu3g1317 541 MobiDBLite consensus disorder prediction 1 124 - -
Ssu3g1317 541 PANTHER NOTUM-RELATED 136 536 IPR004963 GO:0016787
Ssu3g1317 541 Pfam Pectinacetylesterase 171 519 IPR004963 GO:0016787
Ssu3g1317 541 PANTHER PECTIN ACETYLESTERASE 4 136 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1317 Ssu-Chr3 32720694 32731979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1317 124 506 Carbohydrate Esterase AT3G09410 56.203 2.41e-161 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1317 K19882 - gmx:100792819 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1317 3 32720694 32731979 Ssu3g1317 3 32720694 32731979 ECH