Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1274 ATGTTTCTCAAGCTTGTAGCAGTGGTGTTTTTGCTGGCAACAATAGTAGCCAGTGATGACACCAGTTTCACCTATAATGGGTTCCAATCATCTCATCTGTACCTTGATGGCAGTGCTGACTTCACCACCACTGGCATGCTTAAGCTCACCAACGACACCGAGCAACAAAAGGGTCATGCTTTCTTCCCAAGTCCAATAGTCTTCAAGAACACCTCAGATGGAAGTGCATCTTCTTTCTCCACCACTTTTGTGTTTGCCATAAGGTCTGAGTATCCCAATTTGAGTGGTCATGGGATTGTTTTTGTGGTTTCTCCAGCAAAAGAATTTCAACATTCTCTACCAAGCCAGTACCTTGGCCTCTTCAATGAGACTAACAAtggcaacaacagcaacaatgtTTTTGGGGTGGAACTTGATACCATTCTGAACACCGAGTTTGGTGATATCAATGACAACCATGTTGGAATTGATGTCAATGCTTTGAATTCAGTTAGATCAGCTGCTGCAGGATATTACAGCGATGGGGGTTTTAAGAATTTGAGCCTTATCAGTGGCTACCCAATGCAAGTATGGGTGGAATATGATGGCCTAAAGAAGCAGATTGATGTTACTTTAGCTCCAATCAACGTTGATAAACCAGAACGCCCTTTGTTATCATTGAGCAAAGATCTTTCTCCAATTCTGAACAGTAGCATGTATGTTGGATTCTCATCCTCAACTGGGTCAATTCTAAGTTCTCATTATGTTCTGGGTTGGAGCTTTAAGGTGAATGGCCAGGCTCAACAACTTGCAATCTCTGAACTCCCCAAGCTACCTAGACTAGGTAGTAAAGAACAGTCTAAGGTTCTCATTGTTGGGTTGCCTCTGATATCACTCAGTTTGGTTCTCATGGTAGCTCTAGCAGTGGTTCATGTcatcaaaaagaagaagttcGTGGAGCTGCTTGAAGATTGGGAGCAAGACTATGGTCCTCATAGGTTCAAGTACAAAGATCTTAGCCTGGCAACAAAGGGGTTCAGGGAGAAGGAGCTATTGGGAAGTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATGCCAATTTCCAAAATTGAGGTTGCAGTGAAGAAGGTGTCCCATGAATCAAGACAAGGGATGAGGGAATTTGTGGCAGAAATTGTTAGCATTGGCCGTCTTAGGCACAGGAGTTTGGTTCCCCTTCTGGGGTATTGCAGGCGCAAAGGAGAGCTGCTATTGGTCTATGACTTCATGCCAAATGGAAGCCTTGACAAGTATCTCTATAATCAACCAAGAGTGACCTTAAATTGGAGCCAGAGATTTAGAATCACCAAAGGGGTTGCTTCAGGTTTGTTTTATCTACATGAGGAATGGGAGCAAGTTGTGGTCCATAGAGATATTAAGGCTAGCAATGTACTATTGGATGCTGAATTGAATGGTAGATTAGGGGACTTTGGTCTTTCAAGGTTGTATGATCATGGAACTGATCCTCACACTACACATGTTGTTGGAACTCTTGGGTATCTGGCCCCTGAGCATACCAGAACAGGTAAGGCCACTACAAGCTCTGACGTGTTTGCTTTTGGTGCATTTATGCTAGAGGTTGTTTGTGGAAGGAGGCCAATAGAGCAAGTAGGGGAATCTGGGAGTGAAATTCTGGTTGATTGGGTGTATAATTGTTGGAAAAGAGGTGAGATTCTTGAGGCAAGGGATCCAAACTTGGGCACAAATTATAGGCCAGATGAGGTGGAGTTGGTGCTGAAACTTGCTTTGTTGTGCTCACATTCTGAGCCTTTGGCTAGGCCAAGCATGCGCCAGGTTGTGCAATACTTGGATAGGGACGTGCCTCCACCAGACTTGTCTTTGCTTAGCTTAGCTTCCACTGGCTTAACTTTTGGGCTGCATGAAGACTTTCATGACTGTCCAATGTCTTATCCTTCATCTATGGATAGGCCACTCTCCCATACTTCTTCAATTGCTGAATCACTTCTCTCTGGGGGTCGTTGA 2001 0.4338 MFLKLVAVVFLLATIVASDDTSFTYNGFQSSHLYLDGSADFTTTGMLKLTNDTEQQKGHAFFPSPIVFKNTSDGSASSFSTTFVFAIRSEYPNLSGHGIVFVVSPAKEFQHSLPSQYLGLFNETNNGNNSNNVFGVELDTILNTEFGDINDNHVGIDVNALNSVRSAAAGYYSDGGFKNLSLISGYPMQVWVEYDGLKKQIDVTLAPINVDKPERPLLSLSKDLSPILNSSMYVGFSSSTGSILSSHYVLGWSFKVNGQAQQLAISELPKLPRLGSKEQSKVLIVGLPLISLSLVLMVALAVVHVIKKKKFVELLEDWEQDYGPHRFKYKDLSLATKGFREKELLGSGGFGRVYKGVMPISKIEVAVKKVSHESRQGMREFVAEIVSIGRLRHRSLVPLLGYCRRKGELLLVYDFMPNGSLDKYLYNQPRVTLNWSQRFRITKGVASGLFYLHEEWEQVVVHRDIKASNVLLDAELNGRLGDFGLSRLYDHGTDPHTTHVVGTLGYLAPEHTRTGKATTSSDVFAFGAFMLEVVCGRRPIEQVGESGSEILVDWVYNCWKRGEILEARDPNLGTNYRPDEVELVLKLALLCSHSEPLARPSMRQVVQYLDRDVPPPDLSLLSLASTGLTFGLHEDFHDCPMSYPSSMDRPLSHTSSIAESLLSGGR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1274 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 275 IPR013320 -
Ssu3g1274 666 PANTHER - 4 647 - -
Ssu3g1274 666 Pfam Protein kinase domain 339 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g1274 666 SMART serkin_6 339 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g1274 666 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g1274 666 Gene3D Transferase(Phosphotransferase) domain 1 416 618 - -
Ssu3g1274 666 ProSitePatterns Protein kinases ATP-binding region signature. 345 369 IPR017441 GO:0005524
Ssu3g1274 666 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 4 647 - -
Ssu3g1274 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Ssu3g1274 666 CDD lectin_legume_LecRK_Arcelin_ConA 21 258 IPR001220 GO:0030246
Ssu3g1274 666 Pfam Legume lectin domain 21 269 IPR001220 GO:0030246
Ssu3g1274 666 SUPERFAMILY Protein kinase-like (PK-like) 320 621 IPR011009 -
Ssu3g1274 666 CDD STKc_IRAK 345 611 - -
Ssu3g1274 666 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Ssu3g1274 666 Gene3D - 18 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1274 Ssu-Chr3 31339093 31341093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1274 17 666 Receptor kinase-like Gene Family AT2G37710 63.053 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ssu3g1274 Pkinase 7.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1274 - - gmx:100802293 1181.39