Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1233 ATGTACTCAGAAATCAGAATCTTCTTGGTAGGGAAGGTTGTGGGTGCTTCATGGAAAGCTGTTTTCACGGTTGATGAAAAAGAGCGGGAGAAGAATGTTGAGGAATCATTGGAGGCTCTGCAGTTTCTTGAGAATGAGATCAAGGACAAGAAGTTTTTTGGAGGGGAAGAGTTTGGGTTGGTAGATATTGCTGCTGTGTTCATAGCATTTTGGATCCCTATATTTCAAGAAGTAGCGGGGTTGCAGTTATTTACCAGTGAGAAATTTCCTAAGCTCTACAAGTGGAGCCAAGAATTCATGAACCACCCTGTTGTCAAAGAAGTCCTTCCTCCTAGAGACCCACTTTTTGCCTTCTTCAAAGCCCGCTATGAAAGCCTTCCTGcttcaaaatag 393 0.4224 MYSEIRIFLVGKVVGASWKAVFTVDEKEREKNVEESLEALQFLENEIKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEVAGLQLFTSEKFPKLYKWSQEFMNHPVVKEVLPPRDPLFAFFKARYESLPASK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1233 130 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 126 IPR045073 -
Ssu3g1233 130 SUPERFAMILY GST C-terminal domain-like 9 124 IPR036282 -
Ssu3g1233 130 Pfam Glutathione S-transferase, C-terminal domain 23 103 IPR004046 -
Ssu3g1233 130 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 118 IPR010987 -
Ssu3g1233 130 Coils Coil 26 46 - -
Ssu3g1233 130 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 9 126 - -
Ssu3g1233 130 CDD GST_C_Tau 8 122 IPR045074 GO:0004364|GO:0006749
Ssu3g1233 130 Gene3D - 6 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1233 Ssu-Chr3 30048140 30049547 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1233 26 129 Glutathione S-transferase Gene Family AT3G09270 50.962 5.82e-33 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1233 K00799 - gmx:100500680 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1233 3 30048140 30049547 Ssu3g1233 3 30048140 30049547 ECH