Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1229 ATGATAGatagtaatggtggtggtggtggcatgATGGCGATGTTGGTATCATTGGTCAGAATGGTTGTGGTGACGGAGGCAGTGATAGGcaatagtggtggtggtgacgatggcaatggtggtgatgATAGCGATGAAAAAAGTGGTGCTAGTGGTAATGCTAGTAGTGATGGTGGTAGGGGTGGCTATGACATTGATGGTGGTATTggtgacgatggtggtggcgatggcaaggtggtggtgacaatgttAGGAGCGAAGGCAAGGGTGGTGGAAGTAGAGGTGGTGGGGGTGGCGACAATGacgttggtggtggtggtgatggcaagGGTAGTGGGTGCTTCATGGAAAGCTGTTTTCCCGGTTGATGAGAAAGAGCGTGAGAAGAATGTTGAGGCCTCATTGGAGGCTCTGCAATTTCTTGAGAATGAGATCAAGGACAAGAAGTTCTTTGGAGGAGAAGAGTTTGGGCTGGTAGATATTGCTGCTGTGTTCATAGCATTTTGGATCcctataattcaagaaatagcGCGGTTGCAATTATTTACCAGAGAGAAATTTCCCAAGCTTTACAAGGGGAGCCAAGAATTCATGAACCACCCTGTTGTCAAAGAAGTCCTTCCTCCTAGGGACCCACTTTTTGCCTTCTTCAAAGCCCGATATGAAAGCCTTGCTGcttcaaaatag 687 0.3581 MIDSNGGGGGMMAMLVSLVRMVVVTEAVIGNSGGGDDGNGGDDSDEKSGASGNASSDGGRGGYDIDGGIGDDGGGDGKVVVTMLGAKARVVEVEVVGVATMTLVVVVMARVVGASWKAVFPVDEKEREKNVEASLEALQFLENEIKDKKFFGGEEFGLVDIAAVFIAFWIPIIQEIARLQLFTREKFPKLYKGSQEFMNHPVVKEVLPPRDPLFAFFKARYESLAASK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1229 228 CDD GST_C_Tau 114 220 IPR045074 GO:0004364|GO:0006749
Ssu3g1229 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 111 224 IPR045073 -
Ssu3g1229 228 Coils Coil 124 144 - -
Ssu3g1229 228 Pfam Glutathione S-transferase, C-terminal domain 115 201 IPR004046 -
Ssu3g1229 228 Gene3D - 105 228 - -
Ssu3g1229 228 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 111 224 - -
Ssu3g1229 228 MobiDBLite consensus disorder prediction 32 67 - -
Ssu3g1229 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 85 216 IPR010987 -
Ssu3g1229 228 SUPERFAMILY GST C-terminal domain-like 107 222 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1229 Ssu-Chr3 29945865 29951691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1229 107 227 Glutathione S-transferase Gene Family AT3G09270 44.628 2.93e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1229 K00799 - gmx:100500680 211.075