Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1228 ATGGTTGATGAGAGAGAGCGAGAGAAGGCCACTGAAGAGTTATTTGAGGCTCTGAAGTTTCTTGAGAATGAGCTGAAGGACAAGTATTTTGCTGGAGAGGAGTTTGGCTTTGTGGATATTGCTGCTGTGTTCATACCTATAATTCAAGAGGTAGCAGAGTTGCAATTGTTCACAAGTGAGAAATTTCCCAAGCTCTCTAAATGGAGCCAAGACTTTTACAACCACCCAGTCGTCAAAGAAATTATGCCTCCTAAGGACCAACTTTTTGCCTATTTCAAGGCTCGGGCTCAAAGCCTCGCTGCAAAAAAGGAGAATTAA 318 0.4277 MVDEREREKATEELFEALKFLENELKDKYFAGEEFGFVDIAAVFIPIIQEVAELQLFTSEKFPKLSKWSQDFYNHPVVKEIMPPKDQLFAYFKARAQSLAAKKEN 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1228 105 SUPERFAMILY GST C-terminal domain-like 3 97 IPR036282 -
Ssu3g1228 105 Pfam Glutathione S-transferase, C-terminal domain 3 76 IPR004046 -
Ssu3g1228 105 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 92 IPR010987 -
Ssu3g1228 105 CDD GST_C_Tau 4 95 IPR045074 GO:0004364|GO:0006749
Ssu3g1228 105 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 98 IPR045073 -
Ssu3g1228 105 Gene3D - 1 103 - -
Ssu3g1228 105 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1228 Ssu-Chr3 29902706 29903023 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1228 4 101 Glutathione S-transferase Gene Family AT3G09270 48.544 8.51e-26 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1228 K00799 - gmx:548029 181.8